Zingiber officinale (ginger): 121981151
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Entry
121981151 CDS
T08725
Name
(RefSeq) golgin candidate 5-like
KO
K20286
TATA element modulatory factor
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121981151
Membrane trafficking [BR:
zof04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121981151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Seryl_tRNA_N
DUF7491
SSXT
Motif
Other DBs
NCBI-GeneID:
121981151
NCBI-ProteinID:
XP_042389461
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All DBs
Position
5A:complement(97760528..97776574)
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AA seq
959 aa
AA seq
DB search
MAWFGNVSLGGFSDLAGAVSKLSESVKNIEKNFDSALGLEEKHDPDDDGSGKWTSTSGRK
GLLEPMMSFMGKKEEESTSGQTVQVESLQHSLTAEKHEMTSSFTSSEPMSKSTISSEKEN
EDSVTIDTDILCTNANSMIEEPQILVVNKTVESNCLPAEMGSSLAGSKEEVDPSSIFQQT
TDGDIQASDNLKPEHPAQQIADSVELIVSNVLKEPEETDHIYDSQGTNVIQESQAEQPLD
KWSSEHSKVIVPDNLDKEASVALPVSIEKCDNVNEPSYNNVSDAIHSEQDHAMSSDLVSH
DTNEPPKSLKVNSRERDDEDENAKLSFTSSDNALGSVDQPGEIEKVKQEMRMMESALKGA
ARQAQAKADEIAKLMNENEQLKSVIEDLKSKSKEEELDTLRDEYHQKVSALERKVYSLTR
ERDTLRREQNKKNDAAALLKEKDEIISQVMAEGEELSKKQAAQEATMRKLRAQIREFEEE
KQRLNSKLQVEETKVESMKRDKAATEKLLQETIERNQAELAAQKEFYTNALNAAKEAEAL
AEARANNEAKVELESRLKEASEREAMLIQTLEELRQSLTRTEQQAAFREEMLRRDMDDLQ
RRYHDSELRYTEMITQVPESTRPLLRQIEAMQETAARRAEAWAGVENALNSRLQEAEAKA
AAAEEKERTLNERLSQNLSRITVLETQIACIRTEQTQLSRSLEKERQRASESRQEYLAAI
EEAATQEGRAKQFEEELKEIRNKHRRELQDEVVHRELLEKELERVRAAKDELEKTISHES
IPVANQNSTKNLQIRKLSTAGSSSSMEESFFLQASLDSSDNPFSEKRHSGEAMVSPYFLK
SMTHSTYEASLRQKDGELASYISRLASLEAIRDSLAEELVKMTEECEKLRAEAAALPGLR
AELEALRRRHSAALELMGERDEELEELRADIIDLKEMYREQVDLLVNRLQRVTSSVGVN
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggttcgggaatgtgtcattggggggcttctcggatttggctggggccgtgtcg
aaactgagtgaaagcgtcaagaacatcgagaagaatttcgatagtgctctcggattggag
gaaaaacatgatcccgacgacgatggttctggaaaatggacatcaacatcaggtagaaaa
ggccttttagaacctatgatgtcctttatggggaaaaaagaagaggaaagtacttctgga
caaacagtacaagttgaatctttacaacactctttaacagctgaaaagcatgagatgacc
tcaagttttacatcctctgaacccatgagtaaatcaactatttcttctgaaaaggaaaat
gaagattctgtaaccatagatactgacatcctttgtactaatgccaacagcatgattgaa
gaacctcaaatccttgttgtgaataaaactgttgaatcaaactgtttaccagctgaaatg
gggtcttcattggctggaagcaaggaagaagttgatccatcatccattttccaacagaca
acagatggtgacatccaagctagtgataacttaaaaccagaacatcctgcacaacaaatt
gctgatagtgtagaattaattgtcagcaatgtactcaaagaacctgaagagacagatcat
atatatgattcacagggaactaatgtcatacaggagagtcaagctgagcagcctctagat
aaatggtcttctgaacattctaaagtaattgtcccagataaccttgataaagaagcctca
gttgctcttcctgttagtatagaaaagtgtgataatgtcaatgaaccatcatataacaat
gtttcagatgcaatccatagtgagcaggatcatgctatgtcatctgacttggtatctcat
gatacaaatgaacctcccaagtctttaaaagtgaactccagggaaagagatgatgaagat
gagaatgccaagctttcatttacttcttccgataatgcattgggttcagtggatcaacca
ggggaaatagagaaggtaaaacaagaaatgagaatgatggaatctgcattaaaaggagct
gctaggcaagcccaggctaaagctgatgaaattgctaaactgatgaacgagaatgaacag
ttgaaatctgtcattgaggatctaaagagtaaatcgaaagaagaagaattagacacattg
cgagatgaatatcatcaaaaggtgtcagctcttgaaagaaaggtttattctctcaccaga
gaaagggatacattaaggagagaacaaaacaaaaagaatgacgctgctgctcttttgaag
gagaaagatgagataatcagtcaagttatggctgaaggtgaagagctgtcaaaaaagcaa
gctgctcaagaagcaaccatgaggaaactaagggcgcagattcgggaatttgaagaagaa
aaacaaagactgaactcgaagctccaggttgaggagacaaaagtagaaagtatgaagagg
gataaggcagctactgagaagctgctgcaggaaaccatagaaagaaatcaagcagaactt
gctgctcagaaggaattttacaccaatgcacttaatgcagccaaagaagctgaagcctta
gcagaggcacgagctaacaatgaggccaaggtcgaacttgaaagtcgactgaaggaagca
agtgaacgtgaagctatgttgattcagacgcttgaggagttgaggcagagtctgactaga
actgagcagcaggcagcatttagagaagaaatgctgagaagggatatggatgatcttcaa
agacgctaccatgacagtgaactccgctacactgaaatgatcactcaagttcctgagtca
actcgaccacttctaagacagattgaagctatgcaggagaccgctgcaagaagagctgaa
gcctgggctggcgtggaaaatgcactaaactctcgcttgcaggaggcagaagccaaagct
gcagctgcagaagaaaaggaacgaaccctaaatgaacgcctatctcaaaacttatctcgg
attactgttcttgagactcagattgcctgtatcagaacagagcagacacaactaagtagg
tcacttgaaaaggaaaggcaaagggcatctgaaagcagacaagaatatctagcagcaata
gaagaagctgctactcaagagggccgtgccaagcaatttgaagaagaactcaaggagata
agaaataaacacagaagggagttacaggatgaggtggttcacagagaacttttggaaaag
gagctcgaaagggtaagagctgccaaagatgaactggaaaaaactatttctcatgaatcg
attccagttgcaaatcaaaattcaaccaaaaacttacagattaggaagctttcaactgct
gggagctccagtagtatggaagaaagctttttcttgcaagcgtctttggactcatcagat
aaccctttctcagagaaaaggcactctggggaagcaatggtttctccatatttcctgaag
agcatgacacatagtacttatgaagcatcattacgccagaaggatggtgaacttgcatca
tacatttcacgcttggcttctttggaagctattcgtgattctctcgctgaagaactagtc
aaaatgacagaggagtgtgaaaagctgagagcagaagctgcagctttacctgggttaaga
gcagagttagaagccttgcgacgaaggcattcagcggcactggaacttatgggtgaacgt
gatgaagagttggaggaacttcgagccgatatcatcgacctgaaggagatgtaccgagaa
caagtggatttgcttgtgaacaggcttcagagagtaacctcatcagttggtgtgaactag
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