Zingiber officinale (ginger): 121981232
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Entry
121981232 CDS
T08725
Name
(RefSeq) syntaxin-71-like
KO
K08506
syntaxin of plants SYP7
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121981232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121981232
Membrane trafficking [BR:
zof04131
]
SNARE
SNAP-25[C] (Qc)
Syp7
121981232
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Ran-binding
DUF5089
XhlA
PYNP_C
FliJ
Motif
Other DBs
NCBI-GeneID:
121981232
NCBI-ProteinID:
XP_042389589
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Position
5A:100920046..100922811
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AA seq
267 aa
AA seq
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MSVIDILTRVDAICKKYEKYDVERLNGDNVAGDDAFARLYASVDLDVESALQKAETASQE
KNRAAVVALNAEIRRTKARLLEEVPKLQRLALKKVKGLSKEELSTRNDLVLALPDRIQSI
PDGSTNGAKATGSWTASASRTEIRFDSTSDGRFESEYFQQTEESNQFRQEYEMRKMKQDQ
GLDIISEGLDTLQNMAHDMNEELDRQVPLMDEIDSKVDKATSDLKNTNVRLKETVNQLRS
SRNFCIDIILLCIILGIAAYLYNVLKK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcatcgacatcctcacgcgcgtcgacgctatctgcaagaagtacgaaaagtac
gacgtcgagaggctcaacggggacaacgtcgccggtgatgacgcctttgctcgcctctac
gcctcagtcgacttagacgtagagtccgccctccagaaagcggagacggcgtcccaggag
aaaaatcgggcagcggtagtggctctgaatgcggagattcggcggaccaaggctcgtttg
ttggaggaggtcccgaagctgcagaggttggccctcaagaaggtaaaaggcctctccaaa
gaagaactttccacacgtaatgatttggtacttgcactgccagacagaattcagtctatt
ccagatggcagtacaaatggagcaaaagcaactggtagctggacagcatcagcttctcgc
acagaaattagatttgattctacatcagatggaagatttgagagtgagtattttcagcag
actgaagaatcaaaccaatttaggcaagagtatgagatgcgcaaaatgaaacaggatcaa
ggcttagacattatatctgaaggtctggatacactgcaaaatatggctcatgatatgaat
gaggaacttgacaggcaagtccctttaatggatgaaattgacagtaaggtggacaaggct
acttcagacctgaaaaacactaatgttagactcaaggaaactgttaatcagctacgatcc
agtcgcaacttttgcattgacatcattttgttatgcattattcttggtattgcagcttac
ctgtacaatgtgttgaagaagtga
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