KEGG   Zingiber officinale (ginger): 121981247
Entry
121981247         CDS       T08725                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    121981247
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:zof03000]
    121981247
   03021 Transcription machinery [BR:zof03021]
    121981247
Transcription factors [BR:zof03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    121981247
Transcription machinery [BR:zof03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     121981247
  RNA polymerase III system
    TFIIIB
     121981247
  RNA polymerase I system
    SL1/TIF-1B
     121981247
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 121981247
NCBI-ProteinID: XP_042389609
LinkDB
Position
5A:complement(101332394..101338272)
AA seq 200 aa
MAEQGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFCSYEPELFPGLIYRMRQPKIVLLIFVSGKIVITGAKVREE
TYTAFENIYPVLTEFRKNQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atggccgaacagggcctagaggggagccaacctgttgacctctccaaacacccttctggc
atcgttccgacacttcagaacattgtttcaactgttaatctggactgcaagttggatctt
aaagcaatagctctacaagctcgtaatgcagagtacaatccaaagcgttttgctgctgtt
attatgcgaataagagagccaaaaactactgcattgatatttgcatctggaaagatggta
tgtactggagcaaaaagcgaacagcaatcaaaactcgcggcaagaaagtatgctagaata
attcagaagcttggttttcctgccaagtttaaggatttcaagattcagaatattgtgggt
tcatgtgatgtcaaattcccaatcaggctagaaggcttagcatattctcatggtgccttt
tgcagttatgaaccagagctcttccctggtctgatctaccgaatgaggcaaccaaagatt
gtgctactgattttcgtatcaggaaaaattgttattactggagctaaggtgagagaagag
acttacacagctttcgaaaacatatatccagttctaacagagttcaggaaaaatcaacaa
tga

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