Zingiber officinale (ginger): 121981402
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Entry
121981402 CDS
T08725
Name
(RefSeq) probable E3 ubiquitin-protein ligase XBOS32 isoform X1
KO
K19044
E3 ubiquitin-protein ligase XBAT32/33 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121981402
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121981402
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121981402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
121981402
NCBI-ProteinID:
XP_042389829
LinkDB
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Position
5A:113068980..113089348
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AA seq
491 aa
AA seq
DB search
MGFLSVVGNSFGCSATGERLVSAARDGDLQEAKALLEVNPRLARYSTFGVRNSPLHYSAA
QGHHEIVSLLIESGVDVNLRNTRGQTALMQACQYGRWEVVQTLIIFKANIHRTDYLNGGA
ALHFAAIKGHTRCIRLLLADYVPSISNFLKMMRSKSKRESSIPDFDKSALSKVVNQKADG
GITALHMAALNGQAETVHLLLDLGASVSEVTVKDGSTIDLIGAGSTPLHYAACGGNAMCC
QVLIARGASLSAENDNGWTPLMVARSWHRNLIIEILSHRSSGRIKVLPSPYLSIPLMSIM
KIARELGWRSTTQSPACTDPCVVCLERRCTVAAEGCNHEFCTRCGLYLCSTTNTSTSLLV
PPGSIPCPLCRHPIVSFAKIPGVSPIRELPRRSISLSLCTACPSVNGFGGTAPMTAQFCK
PEFHFTRAPPFGSSSFRSLSCQRFPSMKMNQTLCMGVPETSPSLVRFSRSGSNLRRVSFT
SQAIVTNAERG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgggatttctaagcgtcgtgggcaattcctttgggtgttccgccaccggagagcggctg
gtgtcggcggcgagagatggggatctgcaagaggccaaagccctcttagaggtcaatcct
cgactagctcggtactccaccttcggcgttcggaattcgccgctccattactccgcagct
cagggtcaccatgagattgtctctcttctgatcgaatctggagttgatgttaacctaagg
aatacacgaggacagactgcattgatgcaagcttgtcaatatggtcgttgggaggttgtt
cagacattaattattttcaaagccaatattcacagaacagattatctcaatggcggagca
gctctccactttgcagctataaagggtcacactcgttgcatacgtcttctccttgctgac
tatgttccaagcatatctaattttttgaaaatgatgaggtcaaaatcaaaacgggaatca
tctattcctgacttcgacaagagtgcattatctaaggttgtgaaccaaaaggctgatgga
ggcatcacagctctgcatatggcagcactaaatgggcaagcagagactgtgcatttacta
ctagacttgggtgccagtgtttctgaagtcactgtgaaagatggatcaacaattgatctt
attggtgctggaagcacaccccttcactatgcggcttgtgggggaaatgcaatgtgttgt
caggttcttatagcaagaggagccagcttgagtgctgaaaatgataatggatggacccct
ttaatggtagcccgttcatggcatagaaatttgattatagaaatcctgagtcacagatca
agtggtcgcataaaggttctcccctccccatatttgtctattcctcttatgagcatcatg
aagattgctagagaattgggttggaggagcacaacccagtcacctgcatgcactgatcct
tgtgttgtttgcctggaaaggagatgcacagtagctgctgaaggttgcaaccatgaattt
tgcaccagatgtggcctgtacctgtgttccaccaccaacacctcaacaagcttgttggtg
ccaccaggatccatcccttgccccttgtgcaggcatcctattgtctcatttgccaaaatt
cctggagtgagtccaatcagggagctgccgagaaggagcataagcttgtctctatgcact
gcctgcccatctgtgaatggctttggtggcactgcaccaatgactgcacagttctgtaag
cccgagttccatttcaccagggcccctccttttggctcctcttctttcaggtcacttagc
tgtcaaaggtttccctccatgaagatgaaccaaacactttgcatgggagttcctgagaca
agcccctcactcgtgagattttcaaggtctggttcgaacttaagacgagtctctttcaca
tcgcaagccattgtcacaaatgctgagaggggttag
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