Zingiber officinale (ginger): 121981422
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Entry
121981422 CDS
T08725
Name
(RefSeq) alpha-L-arabinofuranosidase 1-like isoform X1
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00520
Amino sugar and nucleotide sugar metabolism
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
121981422
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
121981422
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Gene cluster
GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
zf-CHCC
Motif
Other DBs
NCBI-GeneID:
121981422
NCBI-ProteinID:
XP_042389874
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Position
1B:137369246..137384000
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AA seq
685 aa
AA seq
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MLLFCNNKRKRRLAWSPGCYCESMMCVEGASSGALCLVFMLFVVPHCLSQKLEANLSALL
TIDASPQSNHMIPETLFGIFFEEINHAGAGGIWAELVSNRGFEAGGPSTPSNIDPWAIIG
NESSIYVSTERTSCFTRNEVALKMEVLCGDGESVACPDGVGIYNPGFWGMNIEEKKVYNL
ILYLRSPDSIDISVSLTSSDGLLKLASTNIVADASDVSNWTRVELQLEAIATDRTARLQL
TTTKKGIIWFDQVSLIPLDTYKGHGFRKELISMVEDLKPRFIRFPGGCFVEGEWLRNAFR
WRETIGPWEERPGHFGDVWMYWTDDGLGYLEFLQLSEDIGAAPIWVFNNGISHQDQVDTT
SISPFVQDVLDSIEFARGSPDSKWGSVRAEMGHPEPFQLEYVAVGNEDCWKKNYRGNYLK
FYYAIKAVYPDIKIISNCDGSSSPLDHPADFYDYHVYTSASNLFKRNNQFDRTSRTGPKA
FVSEYAVTGSDAGKGSLLASLGEAAFLIGVERNSDVVSMASYAPLFVNTNDRRWNPDAIV
FDSWQQYGTPSYWMQYFFRESSGATFHPSKVQTNSSSLVASAITWQDPADNQNYLRIKVV
NFGKDSVSLKISINGLESAINSFGSTTILTSDNLMDENSFALPNKVVPVSSVLPNAGTAM
DVVIAPQALTSFNLPLAAAEFRSAI
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgttattattttgcaacaacaaaagaaaaagaaggctagcttggtcaccgggttgttac
tgtgaaagcatgatgtgtgtggaaggggcatcttcgggtgctttatgtcttgtttttatg
ttatttgttgttcctcattgcctttctcaaaagctggaggccaacctgtctgcgctgctt
actattgatgcttcacctcaatctaatcatatgattcctgagactctatttggtattttt
tttgaggaaattaatcatgctggagctggtgggatatgggctgagcttgtgagtaacaga
ggttttgaagctggtggtcctagcactccttcaaacattgatccatgggccatcattgga
aatgaatcttccatttatgtgtcaactgagcgaacatcttgtttcacccgtaatgaggtt
gcactgaagatggaggtactctgtggcgatggggaatctgttgcctgtcctgatggtgtg
ggcatatataaccctggattttggggcatgaatatagaagaaaagaaggtatataatctt
atactgtatttaagatcacctgactctatagatatatccgtttcacttacaagctcagat
ggactactcaaactggcttctacaaatattgtagctgatgcttcagatgtgtcaaactgg
acaagggtggagctacagttggaagctatagcaacagacagaactgcgaggcttcaattg
actactacgaaaaaaggaattatttggtttgatcaagtttcgctcattccattagacact
tataaggggcatggcttccgtaaggaattgatatcaatggtcgaagatttgaaaccacga
ttcattaggtttccaggaggttgcttcgtcgaaggtgagtggctacgtaatgcatttcgg
tggagagaaaccattggtccgtgggaagagagacctgggcacttcggtgatgtgtggatg
tactggaccgatgatgggctgggataccttgagtttcttcagctttctgaggacattggt
gcagcccccatatgggtattcaacaatggaattagccatcaggatcaagtggatactacc
agcatttctccttttgtgcaggatgttttagatagtattgagtttgctaggggaagccct
gattcaaagtggggctctgttcgtgctgagatgggacatccagaaccttttcagttagag
tatgttgcagttggaaatgaggactgctggaagaaaaattatcgagggaattacttgaag
ttctactatgccataaaagcggtttacccagatattaagattatttcaaattgtgatggt
tcatctagtccactggatcatcctgctgatttttatgattaccatgtttatacctcagct
agcaatttgtttaagagaaataatcaatttgatcgcacatcacgtactggacctaaggct
tttgttagcgaatatgctgtgactggatcagatgccgggaagggtagccttttagcatca
ctaggagaggctgcattcctcattggagtagaaagaaatagtgacgttgtatctatggca
agttatgctcctctgtttgtcaataccaatgatcgcagatggaacccagatgctattgtc
ttcgattcctggcagcaatatggaactccgagctactggatgcaatactttttcagggaa
tcaagcggtgcgacttttcacccttcaaaagttcaaaccaactctagttcgttggttgca
tctgctattacttggcaggacccagcagacaatcagaattacttgagaataaaggtcgtc
aactttgggaaggatagtgtgagcttgaagatctccattaatggactagaatctgccatt
aactcatttggatcgacaaccatactcacatccgataatttgatggatgaaaattccttc
gcattaccaaacaaggtggtgccggtttcaagcgtattgccaaatgcagggaccgcgatg
gatgtcgtaattgctccacaggcccttacttcgttcaatctgccactagctgccgctgaa
ttcagatctgcaatttga
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