Zingiber officinale (ginger): 121981549
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Entry
121981549 CDS
T08725
Name
(RefSeq) ATP-dependent DNA helicase Q-like 5 isoform X1
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zof03032
]
121981549
03400 DNA repair and recombination proteins [BR:
zof03400
]
121981549
Enzymes [BR:
zof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121981549
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
121981549
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
121981549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
121981549
NCBI-ProteinID:
XP_042390068
LinkDB
All DBs
Position
5A:complement(122997353..123016514)
Genome browser
AA seq
957 aa
AA seq
DB search
MDSGSDSDASHISATPPRNPIPDPPKPGFRVPNPPKLSHRPKSIPRNPSKSKIRSTPKSS
DPPAPEVSLSEELANLHGMPVVNVSQLAYVPDRPASFSRLVLSRRPSIDPSEFLIGGRGE
SSSDFVASSSSGEASLKVPERPKRSRPNGVRFIAPVEQLKRPDCVGEIKGRPCDAAVGRP
DDGKTILNEQLNPRRVHSNFVGFGESREPAKLPKKGREGNFVRLNINGRGRRFTFKNRSN
NGRSISSRSRRYRRKPVAGKHETPAGDDFDSGILVEQRRSSNCSNQLLEEAVTAAGEHPS
DENLLRLLKLTHGYDSFREGQLESIKRVVAGESTMLMLPTGAGKSLCYELPALILPGVTL
VVSPLVALMMDQLRKLPSVIPGGLFSSTQTIEEASETLRRLHEGTIKVLFVSPERLLNAE
FLSLFVDGLSISVLVIDEAHCISEWSHNFRPSYLRLKSSILRRKLSVQCILAMTATATVQ
TFHDITCALEIQPSNRIKICQVRENLQLFVTLSENRLKDLLLLMKTSPLTDMHSIIVYCK
FQNETDLVSKYLCDNNIPSKAYHSGIPAKNRGRIQELFCSNKLRVVVATVAFGMGLDKSD
VQAVLHYSMPESLEEYIQETGRAGRDGKLSYCHLLLDISACYKLRSLCFSDGVDEYAVSK
FLAYIFSNDVHSTGQICSLVKESMSRKFDMKEEVLLTILTQLEISDEQYITLLPPLNATC
SLYFHKTPPMLLADKNILVASILNKSEVKDGHYVFDIPTISNKILVGTVDLINMLQDLKS
LGEVTYDLKDPAFCYTIRKRPDDYCCLSMNITERLCQVERCKVQKLDAMFNVAWSAVKEC
NGVNGCSNSLHTPCIQRKTLDYFDGKDDALNDVALFKMARKSPFLGADIKVFLRSNSCMN
FTPRAVARIMHGISSPAFTSSFWSKSHFWGRYVEVDFAIVMEAAKVELMNFVGKQSN
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggattccggatctgattctgacgcctcacacatctccgccacgcctccccggaaccct
attcccgatccccccaagcctggatttagggttcccaaccctccgaagctcagccacaga
cccaaatcgatcccccggaatccttccaaatccaagatcagatcgacccctaagagttcg
gatccccctgcgccggaggtttccctctccgaagaactcgccaacctacatggtatgccc
gtcgtcaacgtttcgcagcttgcttacgtgcccgatcggcccgcctctttctcacgcctc
gttttgtcccggcggccctccatcgacccttctgaattcttaattggtggccgaggcgaa
tcttctagtgatttcgtcgcgagttccagcagtggagaggcttccttaaaggtgccggag
agacctaagcgctcacggccaaatggagtcaggttcattgctccggtagagcagctgaag
cggccggattgtgttggagaaatcaaaggtagaccttgtgatgctgccgtgggaaggcct
gatgatggcaagaccattttgaatgagcaactaaatcccaggcgcgtgcattctaatttt
gttggatttggcgagtcaagggagccggctaaactgccaaagaaaggcagggagggaaat
tttgttcgcctgaatataaatggtcgtgggaggagattcacctttaagaatcggagtaat
aatgggcgttccatctcctctcgaagtcgcagatatcgtcggaaacctgtagcgggaaaa
catgagactccagcgggggatgattttgattccggcattctggttgagcagagacgaagt
tccaattgtagcaatcagttacttgaagaggccgtaacagctgctggagagcatccatcg
gatgaaaacttgctgagattgctgaagcttactcatggttacgattcattccgtgagggg
cagctagaatcgatcaagcgggtggttgcaggggaatcaacaatgctgatgctgccaact
ggtgctggaaagtcattgtgctatgagctaccagctttgatattacctggagtgacattg
gttgtgagtcctctggtcgccttgatgatggatcagttaagaaagctaccttctgtaata
cctggtggtcttttttccagcacccagacaattgaggaggcttctgaaaccctgagaagg
cttcacgagggaactatcaaggtgctttttgtctcccctgagagacttctaaatgcagaa
ttcttatcattatttgtggatggactgtctatatcagttctagtcattgatgaagctcac
tgcatttctgaatggtcacataactttaggccttcatatttgaggttaaaatcatctata
cttcgaagaaagctcagtgttcagtgcatccttgccatgacagcaactgctacagtccaa
acatttcatgatatcacgtgtgctttagaaattcagcctagtaaccgtattaagatatgc
caagtaagagaaaacttgcagctctttgtcactttaagtgagaatagattgaaggattta
ttacttttgatgaagacttctcctttgactgacatgcacagcattatagtgtactgcaaa
tttcagaatgagactgatttagtgagcaagtatctatgtgacaacaatatcccatctaag
gcttaccacagtggcattcctgcaaaaaatcggggtcgcatacaggaacttttctgttcc
aacaaattaagagtggttgttgcgacagtggcatttggtatggggcttgataagagtgat
gttcaagcggtactgcattatagcatgccagaaagcttggaagaatacattcaggaaact
ggccgtgctggaagggatggcaaactgtcttattgtcatctcctcctagatatcagtgct
tgctataagcttcgcagtctatgtttcagtgatggtgtggatgaatatgcagtaagcaaa
tttcttgcttacatcttttctaatgacgttcactcaactggacaaatttgctccttggtt
aaagagtctatgtccaggaaatttgatatgaaagaagaggttcttctaacaatccttacc
caacttgagatcagtgatgagcaatacattaccctacttccaccactcaatgcgacttgt
tcattgtattttcataagacgccccccatgttactagcagacaagaatattttagttgca
tcaattctaaacaaatccgaagtgaaggatgggcactatgtgtttgatataccgacaata
agcaacaaaattctagtgggaacggttgatttgattaatatgctgcaagacctaaagtct
ttaggggaagtaacatatgatttgaaggatccagccttctgttacacaattcggaagaga
ccagatgactattgctgtctatcaatgaatatcacggaaaggctctgtcaggttgaaaga
tgcaaggtacaaaaattggatgcaatgttcaatgttgcatggtcagcggtgaaagaatgt
aatggcgtcaatgggtgctccaattcattgcatactccatgtattcaaagaaaaactttg
gactactttgatgggaaggatgatgcattgaatgatgttgcattgtttaagatggcacgg
aaaagtccatttttgggagcagatataaaggtgtttctaagaagtaattcatgtatgaat
tttaccccaagggcagttgcgcgaattatgcacggcatcagtagcccagcttttacttct
tcattttggtccaaaagccatttctggggacgatatgtggaggttgattttgcaattgtt
atggaagctgcaaaagtagaacttatgaattttgtgggcaaacaatcaaattga
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