Zingiber officinale (ginger): 121981661
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Entry
121981661 CDS
T08725
Name
(RefSeq) cyclic nucleotide-gated ion channel 17-like
KO
K27629
cyclic nucleotide gated channel 17
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
zof04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121981661
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
121981661
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zof04040
]
121981661
Ion channels [BR:
zof04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
121981661
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Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
121981661
NCBI-ProteinID:
XP_042390215
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Position
5A:complement(127022059..127026065)
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AA seq
660 aa
AA seq
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MEPVKEGGLRFYHHRKEKATKSVQLVSKSALITNKIDAYSPLGSEVFAEDLDPRRKWILD
PQSGIVSIWNCVFLTSCLMVLFIDPLHFYLRVVEKSNTMCIKIDNDLIVSITFLRTLADL
FYTLNIAVKYRTAYVAPSSRVFGRGELVMDGKKIAKRYLKSDFALDVAVALPIPQIFSWL
IVPAIKSLSAENKHNAFAVIVLAQYIARLYLVFSLSHQIIVTSEVFAKTAWVGAAYNLLL
CLIASHVIGASWYLLSLDRVITCWRSQCKLEDGMNGTLCHPTFFYCDQFSQPDRLRWSTV
TNVFQSCDPDGSIFNYGIFKIALTNDIFGTHFSNKYFYCLWWGFQNLSSYGQNLDTSMFV
GETLFSILTIMVGLVLFAHLIGNIQTYLQSTNLRVEEWRLKRRDAENWMRHRQLPHVLCE
RVREFIQYNWMATQGVDEKSILCVLPAHLHRDIHRHLCWDLVRRVPLFSQMDDQLLDAIC
RHLVSSLCTKGTYIVHEGDPVTEMLFIIRGSLDSSTTDGGRADFFNSITLRPGDFCGEEL
VEWALLSKSTGNFPASTRSVRALVEVEAFALHAEDLKLVAKQFRVLHSKRMQDALRFYSH
HWRTWAACFIQAAWQRYKRQKGKNRLWEPFELRKVSEAIEKLDSSTKTESWDQNSGRQRD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgtgaaggaaggaggcctgaggttctatcaccatcggaaggagaaagcaacc
aaatccgtgcaacttgtctcaaaatctgcattgataaccaataaaattgatgcttacagc
cctctgggttctgaagtttttgctgaggaccttgatcctcggaggaagtggatactggat
ccgcaaagtggcatcgtatcaatatggaattgtgttttcctcacctcatgcctgatggtg
ctgtttattgatcctctgcacttttatttgcgtgtggttgagaagagcaataccatgtgc
attaagatagacaacgatttgatagtttccattaccttcttgcgaactcttgccgaccta
ttctacacgctgaacatagcagtaaagtataggactgcatatgttgctccaagctcaaga
gtttttggacggggtgaacttgtgatggatggcaagaagatagcaaaaaggtatttgaaa
tcagactttgctctagatgttgcagtcgcccttccaatacctcagatttttagctggttg
attgtaccagcaatcaagagcttaagtgctgaaaataagcacaatgcatttgccgttatt
gttctagcacagtatatagcaagactatatcttgtgttttctttgagtcatcaaatcatt
gtaactagtgaggtatttgcaaagactgcttgggttggagctgcttacaatcttctgctt
tgcttgattgccagccatgttataggagcttcttggtatcttctttcccttgatcgcgtg
atcacatgctggagatcacaatgcaaactagaagatggcatgaatggaacattgtgtcat
cctacttttttctattgcgatcagttcagtcaaccagatcgtctaagatggtctactgtc
acaaatgttttccaaagttgtgatccagatggtagtattttcaactatggaatatttaaa
attgcattgacaaatgacatttttggcacacatttcagcaacaagtacttttattgcctt
tggtggggattccaaaatctaagctcatatggccagaatttggatacaagtatgttcgtt
ggagaaacattgttttctatacttaccatcatggttggtcttgtgttgttcgcgcatctg
ataggtaacatacagacctacctgcaatctaccaatttaagggttgaagagtggaggcta
aagagaagagatgctgaaaactggatgagacatcgtcaacttcctcatgttttgtgtgaa
agagtcagggaattcattcaatacaattggatggcaactcagggagtggatgaaaaatct
atactctgtgttttgcctgcacaccttcatcgtgacattcaccgtcatttatgttgggat
cttgttaggcgggtgccactcttctcgcagatggatgatcaacttcttgatgccatatgt
aggcatcttgtttcttctttatgcaccaaagggacatacattgttcacgagggtgatcct
gtaacggagatgcttttcatcattcgtgggagtttggatagctctacaacggatggaggt
cgagcagacttcttcaactccataaccctgagaccaggtgatttctgtggcgaggagctg
gtggaatgggctctcctttcgaagtccacaggcaacttccctgcctccaccagaagtgtg
agagcactcgtcgaagtagaggcctttgcgctgcatgcagaagacctcaagctcgtggca
aaacagtttcgtgtgctccatagcaaaaggatgcaggacgctctgcggttctattcacat
cactggagaacatgggctgcttgcttcattcaggcagcttggcaacggtacaagagacag
aaggggaagaatcgtctttgggagccatttgagttgaggaaagtcagcgaggccattgag
aagctggactcctcgacaaagacagaatcttgggatcagaattctggaaggcaaagagat
tga
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