Zingiber officinale (ginger): 121981725
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Entry
121981725 CDS
T08725
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
121981725
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121981725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Crinkler
Motif
Other DBs
NCBI-GeneID:
121981725
NCBI-ProteinID:
XP_042390344
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All DBs
Position
1B:complement(137812981..137816959)
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AA seq
523 aa
AA seq
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MNSVFNEQILADKLSKLNSTQQCIETLSHWCIFHRKNAEQVTQTWDKQFHSSQKEQKVPF
LYLANDILQNSKRTGTEFVSEFWKVLPAALKDVLENGDEHGKNVVSRLVGIWEQRRVFGS
RARDLKEVMLGSEPPPSLDLNKKRSRSSVRILRRDSRSMRIKLSIGGTAEKIVSAMHSVL
NEHPEEESELNKCKAAIRHVGRLEKDVEHACAHDEDPRKEKLAAELQVQEIALKESIEKL
KLVETTRAALVAQLKEAIWEQESELENARTQLQLAQAMVEVAANMQRRLNNEPLLADSNG
PSTKGQKKTAAAIAAEVADKLAASTHSQQIMTSVLSTFAAEAAKNVGLATSSNPSNSYSI
TPPDRRMAAEKPSPISDTTASALIPLQPIVVSTQHQPQAVLVQQGHVQSQPSASQTQFNM
YPVSTQQYLQPSGGVMIGLPYTFNALTPPPPSPQIINLARPSPLPQQQQPMAMMQPPPPP
PMPLTMNQPLPMNQQPPQFTFQQHPAPPNYRPLQPPGMPFYHS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgttttcaatgagcagatactagcggataagctgtctaagctcaacagcact
cagcaatgcatcgagactttgtcacattggtgtattttccaccgtaagaatgcagaacag
gtaactcaaacctgggataaacaattccatagctcacaaaaggaacagaaggtgcctttt
ctgtatctagccaacgacatattgcagaatagcaaacgaactggaactgagtttgttagt
gaattctggaaggtccttccagcagcacttaaggatgttcttgagaatggtgatgagcat
ggaaagaatgttgtgtcccggttggttggcatctgggagcaaaggagagtatttgggtca
cgtgcccgtgacctgaaagaagtgatgcttgggagtgaacctcctccttcattggatttg
aacaaaaaacggtcacgtagttctgtcagaatcttaaggagagattcccgttcaatgaga
ataaaattatcaataggaggaacagcagaaaaaatcgtctctgctatgcacagtgtgctc
aatgaacaccccgaggaggagtctgaattgaacaaatgtaaagctgctatccgtcatgta
gggagattggaaaaggatgttgaacatgcatgtgcccatgatgaagatccccgcaaggag
aaattggcagcagagctgcaggtgcaagagatagctctgaaggagtcaatagagaagctc
aaattagttgaaacaactcgtgcagctcttgtggctcaattaaaggaagcaatatgggaa
caggaatcggaattggagaatgcccgcacccaattacagctggcacaagctatggttgaa
gtggctgccaacatgcagaggcggctcaacaatgagccactcttggctgactcaaatgga
ccctcaaccaaaggccaaaaaaagactgctgctgctattgctgctgaggtggctgataag
cttgcagcctccactcattcccagcaaataatgacatcagttctctccacctttgctgct
gaggctgcaaagaatgtaggccttgcgacatcaagtaatccatctaattcttattccata
accccgcctgatagaaggatggcggcggagaagccctcgccaatctctgataccactgca
tcagctttaattccccttcagccgattgtcgtttccacacagcatcagcctcaagctgtc
ttggtgcagcagggtcacgttcaaagccaaccttcagcatcccagacacaattcaacatg
tacccagtttccacacaacagtaccttcagccttctggtggtgtaatgattggcctacca
tacacttttaacgccttaactccaccaccaccatcacctcagataataaatctagcaaga
ccatctccattgccacagcagcaacagccaatggctatgatgcaaccaccaccgcctcct
ccaatgcccttgaccatgaaccagccgttgcccatgaatcaacaaccacctcagtttacc
tttcaacagcacccagcacctccaaattataggccactgcaaccacctggaatgccattt
taccattcttaa
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