Zingiber officinale (ginger): 121981736
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Entry
121981736 CDS
T08725
Name
(RefSeq) nuclear transcription factor Y subunit B-3-like
KO
K08065
nuclear transcription Y subunit beta
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121981736
Transcription factors [BR:
zof03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
121981736
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
121981736
NCBI-ProteinID:
XP_042390360
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Position
5A:129399324..129400497
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AA seq
219 aa
AA seq
DB search
MADSDNESGGHNQGHSGAGAVGELSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKET
VQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRETE
GEKGGGGPSSSSSTPHQQMDSVAASMGIGTNMPGYAAGAPAMYGGGMTMMMGQQMYAPQS
SSSPYHHPQMTMSEKNSTASGGGFDGAGLNSSTSKPGYK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcggataacgaatccggcgggcacaaccaaggccactcgggagcaggagcg
gtaggggagctgtcgtcgccgaaggagcaggatcgcttcctgcccatcgccaacgtcagc
cgcatcatgaagaaggcgctcccggcgaacgccaagatctccaaggacgccaaggagact
gtgcaggagtgcgtgtcggagttcattagcttcatcacgggggaggcctccgacaagtgc
cagcgcgagaaacgaaagaccatcaacggcgacgacctcctctgggccatgaccaccctc
ggcttcgaggagtacgtcgagcctctcaaggtctacctgcagcgtttccgcgaaacggag
ggcgagaagggaggcggtggtccatcgtcgtcctcgtcaacgccgcaccagcagatggac
tccgtcgccgcctctatgggtatcgggaccaatatgcccggctacgctgccggcgcgccg
gccatgtacggtggcggaatgacgatgatgatggggcagcagatgtacgccccgcagtct
tcatcctcgccgtaccatcatccccagatgaccatgtcggaaaagaacagcacggcgagc
ggtggcggcttcgacggcgccggtttaaactcctccacctccaagccgggatataaatag
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