Zingiber officinale (ginger): 121981748
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Entry
121981748 CDS
T08725
Name
(RefSeq) eukaryotic translation initiation factor 4G-like
KO
K03260
translation initiation factor 4G
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121981748
03012 Translation factors [BR:
zof03012
]
121981748
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121981748
mRNA cycle factors
Stress granule specific factors
121981748
Translation factors [BR:
zof03012
]
Eukaryotic type
Initiation factors
eIF-4
121981748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
121981748
NCBI-ProteinID:
XP_042390385
LinkDB
All DBs
Position
5A:complement(129539662..129551706)
Genome browser
AA seq
1876 aa
AA seq
DB search
MSVNQSRVGRSEAQHRKPVRSGSAGQQKGLVGSGWKGGDSAPRPAVHSPSSYAPSASSVA
PPLSTDRSFKKAGNGHGIQSAVNASSSSESSGAAISHQTPVENGAYPHIRSGYSESTSPA
ATKPAIPKAPSSQSAFGPSTSAPLQSPKVDASKAFTLQFGSINPGLMNGLQIPARTSSAP
PNLDEQNRNQAHTKSMGAISSISVSSAPKPQKHLANRKDGDVHQSSSEEFISVPQIKRDA
SVSVPSAFAVPAPNSSGLPIAGMPLPMHTQFQPQKTQILPKFGVPSVQMHRPGLAANSLQ
MPMTLPMGNNPPVPQQILVPSIQPHFVQQQAMMHQGQALGFVRPIGQLLPPQLGSMGIGI
TTQFPQQPGNYGGPRKTTTVKITHPDTHEELRLDKNSDLSKDGEASGQRPHLNVISQPHP
SPSYPHQTKFSQIQQSSYNQSQLIFPTSVPPGSGQIPTNLQTPRYSYPLNQIGPNLNFLN
SSAINNIPSGKSPSTALHDISEGLQLDALSISASLPPAVQVTMKPSVGLQSVKAGAPLPS
PSVVITMPSTKVEPPMLVKTIADEITLNRKRTEINPGGPGQQLKLISGPSTSISVPVTNT
STTTPVNLRMFTLSEASLSPETPNRDSGSVLDGNDGKKSEDARRCDNLKDNGKTSKLDAT
SSKVVKAPPKSENMTLPDIRTTEPVFGSGMPFASVSVPKIAGNASFGNGDSSSVSPDVFS
GKENFPSQASTSLDTMVGETAIYNLTTANLRVGSTGLNARKEKKSELTEDKSLEASNDSL
GDCNEAKVDSSSTIAKPSEFEKVVLTKQDDKQADYLEGIVIKKEEIDKKLLNGSSGDFAE
LKESRTQNQENNSTDASLNSIDSETVVDCDLYAKDANAHLHTFSSKPKLKSSKEDDLTDC
SGAHMETAPSSIPSVSVEHKRDLKVDLPNDRLTSSTILGKKSKPVSDTMKPKITAGKKKN
RREMFSKADAACTSDLYTAYKGPEVKNEVAVKSESLHSPTAVPNITPIGCPAKDVVSSDE
DTQNKTESDDWENVADISTPKLKTPKHWQHAGEIRKQHDSDVCEATTWKKYTRDFLIKLS
QHFTQLPVDFDTRMNISDILLIPQGKSSLPSPGKNSDRPSSRGDRRAVGPLDDDKWTKSH
AHAPYGFDGNAAINLRPGQGGSHVVARNLPWQASNQSGGILSGSMQSQGGTQRGNLDPGD
RWQRARGLIPSPQTPLPVMHRAEKRYEIGKVSDEEEAKQRQLKGILNKLTPQNFEKLFAQ
VVEVNIDNLVTLTGVISQIFDKALTEPTFCEMYANFCFHLASKLPDFSEANEKITFKRLL
LNKCQEEFERGEREQAEANNVEDEGEVKLSKEEKEEKRLRARRRMLGNIRLIGELYKERM
LTERIMHECIKKLLGQYQNQNQNPDEEDIEALCKLMSTIGEMIDHPKAKEHIDAYFDMMA
KLSTNQQLSSRVRFMLRDAIDLRKNKWQQRRKVEGPKKIDEVHRDAAQERQAQSSRLSRG
PVINSVARRGQAADYGSRGSAPLSSPSPQQVGGHRALPSQARGYGIQDARLEDRHQIEGR
TASLPLQHRSTDDGSITLGPQGGLARGMSIRGHSSILNVTSEISANTEHHRVPSSTNNTI
YTAGRSTRATYDQLSPQDHNNQYGSRDVKISDCKFERSSTSNLPGGQLHATSNSSLAPIS
GTKTFSEEALQEKSISAIREYYSAKDEKEVALCIKELNAPSFYPTMVSVWITDSFERNDG
ERDLLVKLIINLYKSRDCLLNQSQLLQGFESVLASLEDAVNDAPRAPEFLGRIFAKTILE
DVTALSDVGRLILRGGEEPGQLREVGLAAEVLGNILEILQLEGVSITDLIRDSLNLQLND
FLPPSPLKAKKLDAFL
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaatcaatccagggttgggaggtcggaggcgcagcataggaaacccgtccga
tcgggcagcgctggccagcaaaagggattagtcggtagcggctggaagggtggcgattcc
gcccctcggccagctgtccactcgccctcatcctatgctccttctgcttcgtcagtcgcg
ccgccattgtcgactgatcgaagcttcaagaaagcaggtaatggacacggcattcaatct
gcagtaaatgcatcctcaagttctgaatcaagcggtgctgctatttctcatcaaactcct
gttgagaatggcgcttatcctcatatacgttctggatattcggaatcaacatcaccagct
gctacaaaacctgctatccctaaagctccgtcttctcaatcagcttttggaccttcaact
tctgcaccattgcaatcacctaaagttgatgcatccaaggcttttactcttcaatttggc
tccataaatcctggattgatgaatggattacagattcctgctcggactagctcagcaccg
ccaaatcttgatgagcaaaatcgcaaccaggcccataccaagtcaatgggagctatttct
tctatttctgtatcctctgcgcctaaaccacagaagcatctagcaaacagaaaagatggt
gatgttcatcaatccagcagcgaggagttcatctctgtgccacagataaagagggatgct
agtgtctctgtcccatctgcctttgctgtacctgcaccaaattcatctggtctgccaatt
gctgggatgcctttgcccatgcacacacaatttcaacctcagaaaacacaaattctgcca
aaatttggtgtacctagtgtacagatgcatcgacctggtcttgcagccaattcattgcaa
atgccaatgacattacccatggggaataaccctccagttccacagcaaattcttgttcca
agtattcaacctcactttgtgcaacaacaggcaatgatgcaccagggacaagctcttggg
tttgttcgtccaattggtcaactgttgcctccacaattaggcagcatgggaattggcatt
actacacagttcccacagcaaccaggtaattatggtggtccacgaaagaccaccacagtt
aagattactcatccagatacgcatgaagaactgaggcttgacaagaatagtgatttgagc
aaggatggtgaagcttctggacaaaggccacacctaaatgttatttctcagcctcatcct
tctccgtcatatcctcatcaaacaaaattttcccaaatacaacaaagctcttataatcag
tctcagcttatttttccaacttctgttcctccagggagtggacagatacccacaaactta
cagactccaaggtatagttatcctctcaatcaaattggcccaaatttgaacttcttaaac
tcatctgcaatcaacaatattccaagtggcaaaagtccatctacagctctgcatgacatt
tctgaagggcttcaattggatgcattatcaatttctgcctcactaccccccgcagtccag
gtaactatgaaaccatctgttggtttgcaaagtgttaaagctggtgcacctttgccctca
ccttccgtggtcattaccatgccttccaccaaggtagaaccacctatgctagtgaagact
attgcagatgagattactcttaatcgaaaaaggacagagatcaatccaggtggacctggc
cagcaacttaagttgatttctggaccatcaactagtatctctgttcctgtcaccaataca
agtaccacaactcctgtcaacttgagaatgttcacactttctgaagcttcgttgtctcct
gaaacaccaaacagggattctggatcagttctggatggaaatgatggcaagaaaagtgaa
gatgctcgaagatgtgataatttaaaagataatgggaagacgagcaagttagatgcaact
tcttctaaagttgtaaaggcgcctcctaaatctgaaaacatgactcttccagacattaga
actactgagccagtttttggtagcggaatgccttttgcatctgtgtccgtaccaaaaata
gcaggtaatgcttcatttggtaatggtgactcatcttctgtgtcacctgatgttttctct
ggcaaagagaattttccttctcaagcttctacctcacttgacactatggttggtgaaact
gctatctacaatctgacgactgctaacttgagggtgggaagcacaggtttgaatgctagg
aaagaaaaaaaatctgagttaacagaggataaaagccttgaagcatcaaatgattcatta
ggagattgtaatgaagctaaagtagattcatcttctactattgcaaagccttctgaattt
gagaaagttgtattgacaaaacaagatgacaaacaggcagattacttggaagggatagtt
attaagaaagaagagatagacaagaaactgcttaatggctctagtggtgattttgctgaa
ttgaaggaaagtagaacccagaaccaagaaaataactctacagatgcatctttaaactca
attgattctgaaactgtagttgattgtgatctgtatgcaaaagatgccaatgcccacctc
cataccttctcaagcaaaccaaaactgaaatccagcaaggaggatgatttaacagattgt
agtggggcacacatggaaacagccccttcctctattccatctgtttccgtggaacacaaa
cgagatcttaaagttgatttgcctaatgatagattgacttcttcgacaatcttggggaaa
aagagtaagcctgtgtcagataccatgaagcctaagattactgccggtaaaaagaaaaat
aggagggaaatgttttctaaagctgatgctgcctgcacatctgatctttacacagcatac
aagggcccggaggtaaaaaatgaggtggctgttaaatcagaaagtttacatagtccaaca
gctgttccaaatataacaccgatagggtgtcctgctaaggatgtggtttcaagtgatgaa
gatacgcaaaataaaactgagtcggatgattgggaaaacgtagctgatatatctactcca
aagctaaaaacaccaaaacattggcagcatgctggtgagataagaaagcaacatgatagt
gatgtttgtgaagccactacttggaaaaagtacactagggattttctaatcaaactctca
caacattttactcagcttcctgttgattttgacactcgtatgaatatatcagatatcttg
cttattccacaaggaaaatcatcattgccaagtcctgggaagaacagtgatcggccatct
tctcggggtgatcgacgtgctgttgggccgttggatgatgataaatggacaaaatcacat
gcacatgcgccttatggttttgatggaaatgcagctattaatcttcgtcctgggcaaggt
ggtagtcatgtggttgcaaggaatctaccgtggcaggcatccaatcaatctggaggaatt
ctatcaggatcaatgcaatctcaaggaggcacacaacggggtaatcttgatcctggagat
cggtggcaacgagccagaggtttgataccctctcctcaaactcccctaccggtaatgcac
cgagctgagaaaaggtatgaaattggcaaggtttctgatgaggaagaggcaaagcaaaga
caactaaaaggcatccttaacaagctgactcctcaaaattttgaaaagctctttgctcag
gttgtggaggttaacatagacaatcttgtaacccttactggtgtcatctcacagatcttt
gacaaggctttgacggaacccactttctgtgagatgtatgctaatttctgttttcattta
gcaagcaaattgccagatttcagtgaagccaatgagaaaataacttttaaaagattgctc
cttaacaaatgccaggaggaatttgaaagaggggagagagaacaggccgaggctaataat
gttgaagatgaaggtgaggtcaagctgtccaaagaggaaaaggaagagaaaaggctccgg
gcccgcagacgtatgttaggtaatatacgtttgattggagaattatacaaggagaggatg
ttaactgagagaattatgcatgagtgtatcaagaaattactgggtcaatatcagaatcaa
aatcaaaatcctgatgaggaagatattgaagcactgtgcaaattgatgagtacaattgga
gaaatgatagatcaccccaaggcaaaggaacacatagatgcatattttgacatgatggcc
aagctttcaacaaatcaacagttatcttctcgcgttagattcatgttgagagatgcaatt
gatcttagaaagaacaaatggcaacagaggcggaaagttgagggaccaaagaagattgat
gaggttcacagagatgcagcacaagaaaggcaagctcagtctagcagattatctcgtggc
cctgtcattaatagtgtcgcaagacgtggtcaagcagctgattatggttctcgtggttct
gctccattaagctctccaagtccccagcaggttggtggtcatcgagcattgccatctcag
gctcgtggctatggtatccaagatgcacgattagaggatagacatcagattgaaggacga
acagcatcacttcccctccaacatagatctactgatgatggttctattacacttggtcct
caaggtggcctagcacggggaatgtctatccgaggacactcatcaatattaaatgtaact
tctgaaatttctgcaaatactgaacatcatagagtgccatcttctacaaacaatactatt
tatacagcaggaaggtctactagagcaacatatgatcaactaagtcctcaagatcataac
aatcagtacggcagcagagatgtaaagatttcagattgtaaatttgagagatcttcaaca
agtaatctacctggtgggcaattgcatgccacttctaatagcagcctagctccaatttct
ggaacaaaaaccttttcagaagaagctttgcaagaaaaatccatttcagcaattagagag
tactacagtgccaaggatgagaaggaagttgcattatgcatcaaggaattaaatgctcca
agcttttatccgactatggtatcagtatggattactgactcctttgagagaaatgatggg
gaaagggatctcctagtgaagcttattatcaacctctacaaatctagagattgtttgctt
aatcaatcgcaactactccaagggtttgaatctgttcttgcttcattggaggatgctgta
aatgatgcgccaagagcaccagagtttcttggtcgcatctttgccaaaactattttggaa
gatgtgacagctttgagcgatgtaggaagattgatacttcgaggaggtgaagaaccaggc
caactgagagaggttggcctagctgcagaggtgcttgggaacatattggagatcttacaa
ttggaaggagtttccattacggatctcatccgagatagtttgaatctccagctaaatgat
ttcctaccgccgtctccactgaaagcaaaaaagttggatgcttttctgtag
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integrated database retrieval system
