Zingiber officinale (ginger): 121981749
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Entry
121981749 CDS
T08725
Name
(RefSeq) eukaryotic translation initiation factor 4G-like
KO
K03260
translation initiation factor 4G
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121981749
03012 Translation factors [BR:
zof03012
]
121981749
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121981749
mRNA cycle factors
Stress granule specific factors
121981749
Translation factors [BR:
zof03012
]
Eukaryotic type
Initiation factors
eIF-4
121981749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Rep_fac_C
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
121981749
NCBI-ProteinID:
XP_042390386
LinkDB
All DBs
Position
5A:complement(129553787..129567220)
Genome browser
AA seq
1910 aa
AA seq
DB search
MSVNQSRVERTEAQIKKSSRSGSAGQQRGFVGSGGGGGWKGGVGGVSAPPPISSTSSVPP
SSVSPSLSTSRSFKKSFNGQSQSTTSRGNASSEASGAAASAAGHHALENGAQPQTHSLGF
SDGLDPRAAKPVDMPIPRSASRAIPKPPSSQSSAGFSNSQAPSAPAKGDASKITLQFGSI
NPGIMNGLQIPVPARTSSAPPNLDEQIRNQARTESFRAAPKMSAPSIPKQQQLQTKKDVV
GVHQSSSGESHSVHVKRDLTAPVPSAPVVPAPKSSALPITGSSFPIAMPFQPQQLQVPAQ
FGGSNVQLQSPGLAANSMQMPIALPVGNNPQVAQQIYVPSIQSHFMQQQAMMHPGQGLGF
VPPIGHPLPQQLGGLGIGISQFSQQHSGKYGTARKTTVKITHPDTHEELKLDKNIDTFKD
SLSAAQKTLPNVIPPSQSVPTYAASHQMNFFTAMQQTSYSRPQLMYSTNVPLASGQMPAS
SQAPRLSYPVSQSGQKLTYLNSSMSNAVPSGKPVSSAALRGFSEGVNLDTLPVSAPMSNA
VQVTIKPSVGSQSVNAGVFLSTPSVVISMPSTKTEPSKSVKATEENTNSKQKQTVSKPDE
PAQQLKSASGQLNTVKLLVNETTSTNAVPVVSTQTVQCEHLSVSETTGDSGSDLAGNDGR
KNEPVQRSDSFKNNWWKSSKNDLRTQQRHQLDAFSTEGAKVSPTSENTVLLNVEAIEQVE
VKVMLAESSSFKEVLKKETLQDASLGYADSSKEIPSESPSLCQIIDGIDTKSINSNSRVA
NTVSEVRKDRILEVVVSEQFKVSDDSSKDPNDFEVLPSSTHSKSSEQVNAVASSEQESHV
GNFGKVRSGHYDKVIDKLLNDSTSDVGSEMQEERILNLQNRPTNAYLDAADSETIINSLS
TEHEMKSDKDIDLIDSGVARMETVNVCLQPLSVEHKPELKHLDLNSECKPESKPLDSCSD
ALVSATGLGQTEKPLSEIPKPKISTGKKKKREMLSKADAADTSDLYTAYKGPEEEHTAKK
SESINNSTVVKNITQIGNLSKDAASNEEDMHNRAELDDWENAADISTPKLKATDDQPPIN
DARKQHKKVDGYEATSRNKYSRDFLMTLSQYFTHLPINFQTGSDITDALLVNLSGHSPSA
STGRVNDRPSGASRVDRRIVASMDDEKWLKPQVSFGRDNRTDYGHGNATVSLRPGQAGSH
VILRTLPRQTSNQGILSGPMPSPVAQVGLPRGNPDADRWQRARGLIPSPHTPLQVMHKAE
KKYEVGKVSDEEAAKQRQLKAILNKLTPQNFDKLFDQVREVNIDNAMTLTGVISQIFDKA
LMEPTFCEMYANFCFRLATVLPDFSEDNEKITFKRLLLNKCQEEFERGEKEQAEANKDEE
EGETKQFKEEREAKRLQARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQNPDEE
DIEALCKLMSTIGEMIDHPKAKEHMDAYFDMMAKLSTSQKLSSRVRFMLRDAIDLRKNKW
QQRRKVEGPKKIDEVHRDAAQERQAQSSRLSRGPIISNVPRRGPAADYGSRGPTLLTPPG
IQQQVSGIRGLPSRGYGIQDVWLEDRHHLEGRTMSLPLQHRSAEDDSITLGPQGGLARGM
SIRGQPSISNMSSGEIASVVGEHRPISSSTNDTNYMAERSSGAIFDEPSPGYQNNHQSSR
DSKISDRTFERSSTAMLPAGRTHGTSMSSQSTPETRIFSEEVLREKFISAIREFYSAEDE
KEVALCIKELNAPDFYPSMISLWVTDSFEKTNTERDLLAKLIINFCKSRDSLLSQAQLLH
GFELVLSSLEDAVNDAPRAAEFLGRLFTKVILQNVVTLKDIGKLIQEGGEEPGQLKEIGL
AAEVLGNILESIRSESGDAFLNEIRASSNLRLKDFRPPHPLKANKLDEFL
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaatcaatctagggttgagaggaccgaggcgcagatcaagaaatcctctcga
tcgggcagcgccggccagcaaaggggattcgtcggcagcggcggcggcggcggctggaag
ggcggcgtgggcggcgtctccgcccctccgcctatctcttccacatcctctgttcctcca
tcgtccgtctctccatcattgtcgacaagtcgaagtttcaaaaagtcttttaatggacaa
agccaatctacgacaagccgtggaaatgcaagttctgaagctagtggcgctgctgcctcc
gctgctggtcatcatgctcttgagaatggcgctcagccccaaactcactcgcttggattt
tctgatgggcttgacccaagagctgcaaaaccagtcgatatgccaatccccagaagtgca
tcccgagctattcctaagccaccatcttctcaatccagtgctgggttttccaattcccaa
gcaccatctgcaccagctaaaggtgatgcatccaagattactcttcagtttggctcaata
aatcctggaataatgaatggattacagattcctgttcctgctcggaccagctcagctcca
ccaaatctggatgaacaaattcgcaatcaggctaggactgaatcattcagagctgctcct
aagatgtctgcgccttctattcctaaacaacagcaactacaaaccaaaaaggatgttgtt
ggtgtgcatcaatctagtagtggggaatcccattctgtacatgtaaaaagggatctcact
gctcctgttccatctgccccagttgtaccagctccaaaatcatctgctcttcctattact
ggaagttcttttcccatagctatgccatttcaacctcagcaactgcaggttcctgctcaa
tttggcggctccaatgtacagttacaatcacctggtctagcagctaattcaatgcaaatg
ccaatagctttacctgtagggaataaccctcaagttgcacagcagatttatgtccctagt
attcaatctcattttatgcaacagcaagcaatgatgcatccgggacaaggtctagggttt
gttcctccaattggccatccattgccacaacagttagggggcctgggaattgggattagt
cagttttcacaacagcattctggaaaatatggcactgcacggaagaccacagtcaaaatt
actcatccagatactcatgaagagttgaagctggataaaaacattgatacattcaaagat
agtttatctgctgcccagaagacacttcctaatgtaattcccccgtctcaatctgttcca
acatatgctgcttctcatcagatgaacttctttaccgccatgcagcaaacttcttacagc
cgtcctcagcttatgtattctactaatgttcctctggcgagtgggcagatgcctgcaagt
tcacaagctccaagacttagttatcctgtcagtcaaagtggccaaaagttgacctacttg
aattcatccatgtcaaacgcggttcctagtggaaaacctgtatcttctgcagctttgcgt
ggcttctctgaaggggttaacttggataccttacccgtttctgcccctatgtcaaatgca
gtccaagtaacaataaagccttctgttggttcgcaaagtgtgaatgctggggtattcttg
tccacaccttcagtggtaattagcatgccttctactaagacagaaccatctaaatcagtg
aaggctactgaagagaatactaattctaagcaaaaacagacagtaagcaagccagatgaa
cctgctcaacaacttaaatcagcctctgggcagttgaacactgttaaattactggtcaat
gaaacaactagtactaatgctgttccagtagtttcaacacagaccgtacagtgtgaacat
ttatcagtttctgaaactactggggattccggatcagatttggctggaaatgatggcagg
aaaaatgaacctgttcaaagatctgattcttttaaaaataactggtggaagtcgagtaag
aatgatcttagaacccaacaaaggcatcagttggatgcattttctactgaaggagcaaag
gtatctcctacatccgaaaacacagtgcttctaaacgtggaagcaattgaacaggttgaa
gtgaaggttatgcttgctgagtctagttctttcaaagaagtgctgaagaaggaaacattg
caagatgcttcactaggttatgctgattcatccaaagagattccatctgagtctccttcc
ttatgccaaataattgatggaattgataccaaaagtatcaattctaactctagggtggct
aacaccgtttcagaggttagaaaagaccgcatattagaagtagtagtgtctgagcaattt
aaagtgtcagatgattcatcaaaagatcctaatgattttgaagtacttccttcatccaca
cattcaaaatcttctgaacaggtgaatgcagttgcatcatcagaacaagaaagccatgta
ggaaattttggaaaagtgagatctggtcactatgataaagtgattgacaaacttctaaat
gactccactagtgatgttggtagtgagatgcaggaagaacggatactaaatctacaaaat
aggcccactaatgcgtatctggatgcggctgactccgagactataattaattcattgtca
actgaacatgaaatgaaatccgacaaagatattgatttaattgattctggtgtggcccgc
atggagacagtcaatgtatgtcttcaacctctttctgtagagcataagcctgagctgaaa
catttggatttaaatagtgaatgcaagccagagtcaaaacctttggattcatgtagtgat
gcattggtttctgcaacaggcttgggacaaacagagaaacctttgtcagaaattccaaag
cctaagattagtactgggaaaaagaaaaaaagggaaatgctatctaaagcagatgctgct
gacacatctgatctttacactgcatacaagggcccagaggaagaacataccgccaaaaag
tcagaatctataaataattcaacagttgtaaaaaatatcacgcagattggcaatcttagt
aaggatgctgcttcaaatgaggaagacatgcacaacagagctgagttggatgactgggaa
aatgctgctgatatttcaactccaaaactaaaagcaacagatgatcagcctcctattaac
gatgcaaggaagcaacacaaaaaggttgatggttatgaagccactagccgaaacaaatac
tccagggattttctaatgaccctctcgcaatattttactcatcttcctataaattttcag
acaggttcagatataacagatgcattgttagtcaatctatcaggccattcaccttctgca
agtacaggaagggtcaatgatcggccatcaggtgcttctcgagtagaccgacggatagtt
gcctctatggatgatgaaaagtggttgaaaccacaagtgtcatttggtcgtgacaatagg
acagattatggacatggaaatgcaactgtcagtcttcgtcctgggcaagctggcagtcat
gtgattttgaggactcttcctcggcagacatcaaatcaaggaatactttcaggtccaatg
ccatctccggtagctcaggtaggcttgccacgtggtaatccagatgcagatcggtggcaa
cgcgcaagaggtttaataccctctcctcatacacccttacaagtaatgcacaaagctgag
aagaagtatgaagtgggcaaagtttctgatgaagaagctgcgaaacaaagacaactaaaa
gctattcttaacaaattgacacctcaaaattttgataaactttttgaccaggtcagagag
gttaacatagacaatgcaatgacccttactggtgtcatatcacaaatttttgacaaggct
ttgatggaacctaccttttgtgaaatgtatgctaatttctgtttccgtctagcaactgtg
ttaccagattttagtgaagacaatgaaaaaataactttcaaaaggctgctcctgaacaaa
tgccaagaagaatttgaaagaggagagaaagagcaagcagaagctaataaagatgaagag
gagggtgagaccaaacagttcaaagaggaaagggaagcaaaaaggctccaggcccgaagg
cgaatgctgggcaatatacgcttgattggagaattatacaagaaaaagatgttgacagag
agaattatgcacgagtgcatcaagaaattgttgggtcaatatcaaaatcctgacgaggaa
gatattgaagcattgtgcaaattaatgagtacaattggtgagatgatagatcaccccaag
gcaaaggaacatatggatgcatactttgacatgatggccaagctatcaacaagtcaaaag
ttatcctctcgtgtaagattcatgttgagagatgcaattgatcttagaaagaacaaatgg
caacagaggagaaaagttgagggaccaaagaagattgatgaggttcacagagatgcagct
caagaaaggcaagctcagtctagcagattgtctcgtggtcctatcatcagtaatgtccca
agacgtggtccagcagctgactatggttcccgtggtcccactctattaacccctcctggt
attcagcagcaggtttctggtattcgtggattgccatctcgcggctatggtattcaagat
gtatggttagaggatcgacatcaccttgaggggcgaactatgtctcttcccctccaacac
agatctgctgaggatgattctattaccctgggtcctcaaggtggcctggccagaggaatg
tctatcagaggacagccatcaatatccaatatgtctagtggtgaaattgcttcagttgtt
ggggaacatcgtccaatatcatctagcacaaatgatactaactacatggcagaaaggtct
tctggtgcaatatttgatgaaccaagccctggttatcaaaataatcaccaaagcagcaga
gattcaaagatctcagaccgtacttttgagagatcttctacggcaatgcttcctgctggg
cgtacccatggcacttctatgagcagccaatcaactcctgaaacaagaatattttcagaa
gaagttttacgagaaaaattcatttcagcaattagagagttctacagtgccgaggatgag
aaagaggttgcattgtgcatcaaggaattgaatgctcctgacttttatccttctatgata
tcattgtgggtcaccgactcctttgaaaagacaaacacagaaagggatctcttagcaaag
ctgattatcaacttctgcaaatccagagatagcttacttagccaggcacaactactccat
gggtttgagttggtcctttcttcgttggaagatgctgttaatgacgcaccacgagcagct
gaatttcttggtcgtttatttaccaaagttattttacaaaatgtggtgactttgaaagat
ataggaaaactgatacaagaaggtggtgaagaaccagggcaactgaaagaaattgggcta
gcagctgaggtacttgggaacatccttgagagcataaggtcagaaagtggagatgcgttt
ttgaacgagatccgagcaagctccaatcttcggctgaaagactttcgaccacctcatcca
ttaaaggctaacaagttagatgaatttctttag
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