KEGG   Zingiber officinale (ginger): 121981867
Entry
121981867         CDS       T08725                                 
Name
(RefSeq) WD repeat-containing protein 13-like
  KO
K24739  WD repeat-containing protein 13
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:zof04990]
    121981867
Domain-containing proteins not elsewhere classified [BR:zof04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   121981867
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_IFT122_1st Beta-prop_Vps41 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_SCAP WD40_Gbeta Beta-prop_DCAF12 NBCH_WD40 Beta-prop_RIG_1st Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_DCAF4 WD40_like WD40_RFWD3 Beta-prop_EMC1_N Beta-prop_Nup120_160 WDR54 KNTC1_N Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 121981867
NCBI-ProteinID: XP_042390560
LinkDB
Position
5A:132031064..132045608
AA seq 473 aa
MPEAGEELVEPDKEKAEPRPNLNPEFLSCILQPPITHHSPNYTGIRRLLIHRKAVSSPGI
DRRQEWRCNGRGYVAYRNFIRRPRKWENVASQSSSAGNSGRGVPSSVPQSILYDTDTGGS
SRDLRGSNLSFGHYNSLDSDRQIRHAEPAYSFVGMHCIFDNCRASATIVKFGHMSSNLLA
YGASDGSLTICNASEQPSLSHQLKGHSKAITDFDFSSNNQYIASSSMDKTVRVWDVSKGH
CMRIIYGVSPQLCIRFHPVNNNLLSVGNGNKEINELNFSTGHVVTKLLFENEITAMDNDH
TGQHLFAGDAQGCIYSVKVNSHTGAISRSHKNRSIRSKSPITTVQYRTFSFVARGPVLLA
CARDGNICFFSVALEVQGYLTLLCSLKLAPRSHNIGASFCPLLSLGKGEFVVSGSEDANV
YFYDLTRPKHACVNKLQGHGSTVIGVAWNHGENLLASSDSDGTVIVWKRAQSG
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgccggaggcaggtgaagaactagtggagcctgacaaggagaaagcagagccgcggcct
aatcttaatcccgagtttttgagctgcattctccagcccccgattactcaccacagcccg
aactacactggaattcgtcgcctccttatccaccgtaaagctgtctcctcgccgggtatc
gatcgtcggcaggagtggagatgcaatgggagaggatacgtcgcatatcggaattttatt
cgaaggcctaggaaatgggagaatgttgccagccagtcaagcagtgctggtaacagtggc
cgtggggttccatcatcagttccacaatctatactttatgacacagacactgggggttct
agcagagatctaagaggttccaacctatcttttggccactataatagccttgattcagac
aggcagatccggcatgctgaacctgcatattcatttgttggaatgcactgtatctttgac
aactgtagagcttcagctacaattgtaaaatttggacacatgagttccaatttacttgca
tatggtgcatcggatggaagcttgacaatttgtaacgcttctgagcaaccatctctaagt
catcagttgaaaggacattcaaaagctatcacagattttgatttttcatccaacaatcag
tacattgcttcatcttcaatggataaaactgtccgcgtctgggatgtatcaaaaggtcat
tgcatgcgaataatatatggagtttcaccccaactatgcattagatttcatccggtgaat
aacaacttgctttctgttggaaatgggaacaaagaaatcaacgaactcaattttagcaca
ggacatgttgttactaaacttctatttgaaaatgagattacagctatggacaatgatcac
actggacaacatctctttgctggtgacgctcagggatgtatatactctgttaaagtcaac
tctcatacaggagcaatatctaggtctcataagaatcgaagtatcaggagtaaatctcca
attacaactgtacaatatcgtacattctcatttgttgcacgaggacctgtacttcttgcc
tgtgcccgagatggaaatatttgtttcttcagtgtcgctctggaagttcaaggatattta
actctactgtgttctctcaaattagctccaaggtcgcataacattggtgcttctttctgc
cctctgctttccctcggaaagggggagtttgtagtttcgggaagtgaagatgcaaatgtc
tacttctatgatttgactcggcccaagcatgcatgcgttaacaaacttcagggccatggc
tccacagttattggagttgcttggaatcatggagagaacttgttggcttcatctgattca
gatggaactgtgattgtttggaagagggcgcaaagtggttga

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