KEGG   Zingiber officinale (ginger): 121981894
Entry
121981894         CDS       T08725                                 
Name
(RefSeq) protein ELC-like
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03250  Viral life cycle - HIV-1
zof03272  Virion - Hepatitis viruses
zof04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121981894
   03272 Virion - Hepatitis viruses
    121981894
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121981894
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    121981894
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zof04147]
    121981894
Membrane trafficking [BR:zof04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    121981894
Exosome [BR:zof04147]
 Exosomal proteins
  Proteins found in most exosomes
   121981894
SSDB
Motif
Pfam: UEV Vps23_core UQ_con
Other DBs
NCBI-GeneID: 121981894
NCBI-ProteinID: XP_042390603
LinkDB
Position
1B:complement(139191504..139196278)
AA seq 405 aa
MADPAALGGQYVQQFLSAALSQRGPAALPYAEDGKWLIRQHLMALTGAFASLRPRAASFT
HDDGRSSYLLQAEGTIPIVYRGTTYNLPASVWLLEQYPRRPPSVFLTPTSDMLVKPGHPL
VDPSGLVRAAAVPYLASWVYPSSNLVDLVRSLSHLFGLDPPLYSHPAAALPQNQSPPNTR
HPFPSPSNPSPARIYSSLPSPYGGGRFPPSPQTQIASHPIEDPADVFRRNAISKIVENVH
RDAASLRRSQESEMGPLLSLQAELRIRREELSRGVREMVGEKEGLEQQLQLVLMNTDVLE
GWVRETEASSRKVDALNVDNVFEPMDALSRQILELTAADLAVEDTIYSLDKAVQDGAITS
ESYLKSVRALCREQFFHRATLAKARAVQVQAQVTKMAPRVPLYAS
NT seq 1218 nt   +upstreamnt  +downstreamnt
atggctgacccggcggcgcttggcggccagtacgtgcagcagtttctcagcgccgcccta
tcgcagcgcggtccggcggcgctcccgtacgccgaggacggcaagtggctgattcgccag
cacctgatggcgctcaccggggccttcgcatctcttcgcccccgcgccgccagcttcact
cacgacgacggacgctcctcatacctcctccaggctgagggcaccatccccatcgtctac
cgcggcaccacctacaacctccccgcctctgtctggctcctcgaacagtaccctcgccgt
cccccttccgtcttcctcaccccgacctcggacatgcttgtcaagcccggtcaccccctc
gtcgatccctccggcctcgttcgcgccgcggctgttccgtacctcgcttcatgggtctac
ccatcgtccaacctcgtcgaccttgtccgctccctttcacacctcttcggcctcgaccct
cctctctactcccaccccgcggctgctctccctcaaaatcaatctcctcctaacacacgg
catccttttccctccccatccaatccatctccggctcgaatctactcctctctgccgtcc
ccatacggtggtggtcggttccctccctcaccacagacccagattgcgtcgcatccgatt
gaggacccagcggatgtcttccgacggaacgccatctctaaaattgtggagaatgtacac
agagatgcagccagcctgcgtaggtcgcaggagtccgagatgggacctctcctttctctc
caggcggagctgcggattagacgggaagaactttctcgcggggtccgcgagatggttggg
gagaaggaaggtctggagcagcagctgcagctcgtgcttatgaacaccgacgttcttgaa
ggatgggtgagggagaccgaggctagcagtagaaaagtggacgcattaaatgtcgacaat
gtgtttgaaccgatggatgcactctcaagacagatactggagctcacggcagctgacttg
gcggtggaggacacgatctactcactggacaaggcggtgcaagatggggcaataacgtcc
gagtcatatctgaagagtgtgagggcattgtgcagggagcagttcttccacagggcaacc
ttggccaaggcccgtgctgttcaggtgcaagctcaagttacaaaaatggcaccgagggtt
ccactatatgcttcctag

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