Zingiber officinale (ginger): 121981922
Help
Entry
121981922 CDS
T08725
Name
(RefSeq) vesicle transport v-SNARE 13-like
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121981922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121981922
Membrane trafficking [BR:
zof04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
121981922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
XhlA
Prominin
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
121981922
NCBI-ProteinID:
XP_042390639
LinkDB
All DBs
Position
5A:complement(134070551..134091294)
Genome browser
AA seq
221 aa
AA seq
DB search
MSEVFEGYERQYCEISAALSHKLTSTAPLSGEQKNQKVSEIKIGLDDAESLIRKMDLEAR
SLQPSVKAGLLVKLREYKSDLNNLKGGLKRITTVNSNQAAREELLESGMADTLAVSADQR
GRLAFSTERLNQSTERINESRRTMLETEELGVSILQDLHQQRQSLLHAHGTLHGVDDNIG
KSRKILAAMIKRMDRNKWIVGCIITALVLAILLILYFKLTH
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagtttttgaaggctacgagcgccaatactgcgagatatcggcagctctctcg
cataagttgacatctactgcacctctcagtggagaacaaaagaatcaaaaggtatcagaa
ataaaaattggtttggatgatgctgagtccctgattcgcaagatggaccttgaggcaaga
agtctgcagcctagcgtcaaagctggattattggtgaagctgagggaatacaagtcggat
ctgaataatctgaaaggtgggcttaaaaggattactactgtgaactctaatcaagcagca
agagaggagttgctggaatcaggaatggctgatacacttgcggtctctgctgatcaaaga
ggaagattggctttctcaacagagagattgaatcaatctacagaaagaataaatgaaagc
agaagaacaatgttggaaacagaagaactcggtgtttcaattttgcaagacctacatcaa
caacgtcaatctctgttgcatgcgcatggcacacttcacggcgtggatgataatatcggc
aagagtagaaagatcttggcagccatgataaaaagaatggaccgaaacaagtggatagtt
ggctgcatcattactgctctggttttggcaattctactaattctgtattttaagctcacc
cactaa
DBGET
integrated database retrieval system
