Zingiber officinale (ginger): 121981953
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Entry
121981953 CDS
T08725
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
121981953
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zof04040
]
121981953
Ion channels [BR:
zof04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
121981953
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
121981953
NCBI-ProteinID:
XP_042390699
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Position
5A:complement(135149982..135158979)
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AA seq
690 aa
AA seq
DB search
MAESRSYRPQDSCSEKSWGSEMSLLQSRERNSSSTSVQKGLGWFRNNTLFKYMTNSSVEK
PSKTKILDPQGQFLQRWNKIFVITCVIAVSVDPFFFYIPVIKDGNNCLYLHKKIKITASI
LRSFVDSFYLLRILFQFRTGFIAPSSRIFGRGVLVEDLFAIAKRYLSSYFIIDILSVLPL
PQMMILIIMPKLEGIELLNATHALMRIVVLQYIPRLLRIRPLYLEFTRSAGIITETAWAG
AAFNLFLYMLASHVLGASWYLLSIEREDACWRKACGRNNGCEIDSLVCRQRNTQSNNFLA
TDCPINSIQNPPPFDFGIYLPALNNVAQSEKFLEKFFYCFWWGLQNLSSLGQNLKTSTFI
WENLFAIFVSTSGLVLFALLIGNMQTYLQSTTLRIEEMRLKRRDAEQWMSHRLLPENLRE
RIRRHEQYKWQETRGVDEECLIYNLPKDLRRDIKRHLCIALLKRVPMFEIMDDQLMDAMS
ARLKPVLFTENSCIVREGDPVNEMLFVMRGKLESTTTNGGRTGFFNSDILKAGDFCGDEL
LTWALDPNIHTSLPISTRTVKTLTDVEAFALLADDLKFVASQFRRLHSKKLQHTFKFHSQ
QWRTWAACFIQVAWRRYAKKKLEDALHEKEKLLQSVMVSDGAYSSSLGAALYASRFAANM
LRGLRRNTSKARPMMFIPKPAEPDFSVEEH
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagcaggagttacaggcctcaggattcgtgttcagagaaatcttggggttca
gagatgtctcttctgcaaagcagagaaagaaattctagttcaacaagtgtccaaaaagga
cttggttggtttagaaacaatactctctttaaatatatgacaaattcatctgtggagaag
ccttccaaaacaaaaattctagatcctcaaggacaatttctccagaggtggaataaaata
tttgtcataacttgtgtgatagcagtgtctgtagaccccttcttcttctacatcccagtt
attaaagatggcaataattgcctttatttacataagaagataaagatcactgcgagtata
ctgcgatctttcgtagatagtttctacttactccgtatcttatttcaatttcgaactgga
ttcatcgctccttcatctagaatatttggacgaggtgttttagttgaagatttgtttgct
attgccaagagatatttatcatcatatttcataatcgacattctttcagttcttccgctt
cctcagatgatgatcctgatcataatgcccaagcttgaaggaatagaactcctgaatgcc
acacatgcattaatgcgtatagttgtattacaatatattccacgacttcttaggatcagg
ccattgtatcttgaattcactaggtctgctggtataattacagagacagcatgggctgga
gctgcttttaaccttttcctttatatgcttgcaagccatgtcctgggagcttcatggtat
ttgctttctattgaacgtgaagatgcatgttggagaaaagcttgtggccgtaataatggt
tgtgaaattgattctttagtctgcaggcaacggaacacccagagcaataattttttggca
actgattgccctattaacagtattcaaaatccccctccctttgactttggaatatatcta
ccagctctcaacaatgttgctcaatcagagaaattcttggaaaagttcttttattgcttt
tggtggggacttcaaaatttaagttctcttggacaaaacctcaagacaagcactttcata
tgggagaatttgtttgcaatttttgtttccacctcgggtttggttctgtttgcacttctg
ataggaaacatgcagacgtatttgcaatctaccactttgagaatagaagagatgagactg
aaaaggagagatgcagaacaatggatgtcacatcggttgcttcctgagaatctaagagag
cgaatacgccgtcatgagcaatacaaatggcaagaaacaagaggggtagatgaagagtgc
cttatttacaaccttcctaaagaccttcgaagagatataaagcgccacctctgcatagca
cttctcaagcgggttccaatgtttgagataatggacgatcaactgatggacgccatgtca
gcccgcctcaaaccagttctcttcactgaaaacagttgcattgtccgcgaaggagaccca
gtcaatgaaatgctattcgtcatgcgtggaaagctagagagcacaaccacaaatggcggg
agaactggcttcttcaattcagacatcctcaaggccggagacttttgtggagatgagctt
ctcacctgggctctcgaccccaacatccacaccagcctcccaatatccaccaggacagta
aaaacgctcactgatgtcgaagcctttgccctgttagccgacgatctgaaatttgttgct
tcccaattcagaaggctacacagcaagaagctgcagcatacgtttaaattccattcacag
cagtggaggacatgggctgcttgtttcatacaggtagcttggcgcagatacgcaaaaaag
aagctcgaggacgctctacatgaaaaggagaagttgctgcaatcagtaatggtgagtgat
ggtgcttactcatcaagtcttggtgctgcattatacgcttcgaggtttgctgccaacatg
ctgcggggattgcgacgaaatacgagtaaagctcgtcccatgatgtttattccaaagcca
gcggagccagatttttctgtggaagaacattag
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