Zingiber officinale (ginger): 121981985
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Entry
121981985 CDS
T08725
Name
(RefSeq) ubiquitin-conjugating enzyme E2 27-like
KO
K04649
ubiquitin-conjugating enzyme (huntingtin interacting protein 2) [EC:
2.3.2.23
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121981985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121981985
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.23 E2 ubiquitin-conjugating enzyme
121981985
Ubiquitin system [BR:
zof04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
121981985
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UQ_con
UBA
UBA_7
DUF1421
RWD
UBAP-1_UBA2
Motif
Other DBs
NCBI-GeneID:
121981985
NCBI-ProteinID:
XP_042390750
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Position
5A:135994704..135998791
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AA seq
195 aa
AA seq
DB search
MMDVSRVQKELVECNRDKAISGVCISLADGGTDLSHLRGTIFGPVDTPYEGGIFAIDIRL
TSGYPFEPPKMQFITKVWHPNISSQNGAICLDILKDQWSPALTLKTALLSLQALLSAPAP
DDPQDAVVAKQYLDEYPTFVSTARYWTEAFAKGSSVSIEEKVQKLVDMGFPEDLVRSTLK
SVNNDENLALEKLCS
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgtttctagggttcagaaggagctggtggagtgcaaccgtgataaggccatc
tccggcgtctgcatctccctcgccgacggcggcaccgacctatcgcatctccgtggcacc
atctttggccccgtcgacaccccctacgagggcggcatctttgccatcgatatccgatta
accagtggctatccctttgagcctcccaaaatgcaattcattacaaaagtttggcaccca
aatattagtagtcaaaatggagccatatgcttggacattctcaaggatcagtggagtccc
gccctcacattgaagactgccttactatcattgcaagctcttctctcagcgcctgctcct
gatgacccccaagatgctgttgttgccaagcagtatctggatgagtaccccacatttgtg
tctacagctcggtattggacagaggcatttgctaaagggtcatctgtcagcattgaagaa
aaggtccagaagttagtcgacatgggttttccggaggaccttgtgaggagcacgctgaag
agcgtcaacaacgacgagaacctggctcttgagaagctctgctcttga
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