Zingiber officinale (ginger): 121982017
Help
Entry
121982017 CDS
T08725
Name
(RefSeq) two-component response regulator-like PRR95 isoform X1
KO
K12130
pseudo-response regulator 5
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
121982017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
CCT
DUF7057
HEAT_HEATR1
Motif
Other DBs
NCBI-GeneID:
121982017
NCBI-ProteinID:
XP_042390799
LinkDB
All DBs
Position
1B:139433450..139437959
Genome browser
AA seq
624 aa
AA seq
DB search
MGSGEKRRKVAEAHAVVESRDWEEEDERKEEKGLDEVRWEKFFPRMPVRVLLVEGDDSTR
QIIAALLRKCSYIVATASDGLKAWDTLKEKPQNIDLVLTEVDLPSISGFGLLTMIMDHDP
CKNIPVIMMSSHDCMGIVFKCMLKGAADFLIKPIRKNELRNLWQHVWRRQIVNGAGDIHE
IQDNCEVKHNRKSHYGKMEDSVECVAIRQANAECSEQGSDAHSSCTRYDMEAQSEHKKIE
LKLPIAPGATMDQSGQTIQMRNVFNNESSAKVNTTVEMEVIQKERLDCNNIDNETYGQKL
HQDRTSKDDVELVRDCTWKSNFVPQLELFLTQNKGPFSEKQECDKSSAWNHSSLSAFSLR
VCCRYNSKTVIPTMLQQKSLGYESSRLKPVDPSKIQGIRINVEEINSAFGGSKVQDGRAV
QCTPIQVTPFSLPIGDGSLGFECTSTVMQQMLHPLSGQSFWDPTTASIWQEAAKQPHSSH
RPDQENLDVADGRSSSYSSAEKDDKTTALDERRHVTAAAGESGGSSNCNSSNLSGTNVFW
PMAMTGNDEGKIASDGTKPADCHGLTQRELALNKFRLKRKERCFEKKVRYQSRKLLAEQR
PRVKGQFVRQEKLNPRPAIAGAFS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggggtctggagagaagaggcggaaagtggcggaggcgcacgcggtggtggagagccgg
gattgggaggaagaggacgagaggaaggaggagaaaggactagatgaagtgagatgggaa
aagttctttccgaggatgccggtgagggtactcctcgtggaaggagacgattccactcgg
cagatcatcgcggcgctcctccggaaatgtagctacatagttgctacagcatcagatggc
ttgaaggcatgggacaccttgaaggagaaaccccagaatattgaccttgttctgactgaa
gttgacttgccatcaatttcaggttttggtcttcttaccatgataatggaccatgatcca
tgcaagaacattcctgtaataatgatgtcttcccacgattgtatgggcatcgttttcaaa
tgcatgttaaaaggtgcagcagattttctcattaagccgatccgcaagaacgagcttagg
aatttatggcagcatgtctggagaaggcagattgtaaatggagctggcgatatacatgaa
attcaggacaattgtgaggtaaagcataatcggaaatctcattatggtaaaatggaagat
tctgttgagtgtgtggccatcaggcaagcaaatgcagaatgcagtgagcaagggagtgat
gctcatagttcttgtacaaggtatgacatggaagctcaaagcgaacacaagaaaatcgag
ctgaagctaccgatagcacctggtgcaaccatggatcagagtgggcagactattcaaatg
agaaatgtattcaataatgaaagttcagctaaagtgaatacaacggtggagatggaggtg
atacaaaaagagcgtcttgactgcaacaacatcgacaatgaaacttatggccagaaactc
catcaagacagaacttccaaggatgatgttgagttggtccgtgattgcacatggaagtcg
aactttgtccctcaattggagctctttttgacacaaaacaagggacccttctcagagaag
caagaatgtgacaaatcaagtgcatggaaccattcgagtttgtctgctttttcactcagg
gtttgttgcagatataatagtaaaacagtcatccctacaatgctgcagcagaaaagcctc
ggatatgaaagcagtagacttaagcctgttgatccttcaaaaattcaaggaatcagaatc
aatgttgaagagattaactctgcatttgggggatctaaagttcaagatgggagggcagtt
caatgcacccccatccaagtcaccccattttcgcttccaattggagacggttctttgggt
tttgagtgtactagcacagtcatgcaacaaatgttgcatccactgtcaggtcagtctttt
tgggatcccactacagcatccatatggcaggaagcagccaaacaacctcactcttcacac
agacctgaccaagaaaatctcgatgtggctgatggtagaagttcatcttacagttcggca
gaaaaggacgacaaaactactgcgctagatgaacgtaggcatgttacagcagcagctgga
gaaagtgggggtagtagcaattgcaatagcagcaatctcagtggaacaaatgtcttctgg
cccatggcaatgacgggaaatgatgagggcaaaattgcttctgatggaacaaagccagca
gattgccatggcttaacccaaagggaattggccttgaataaatttcgactgaagagaaaa
gaaagatgctttgagaagaaggttcgctaccagagcagaaaattactcgcagaacagcgt
ccaagagtgaaggggcagttcgttcgacaagaaaagctcaatcctcgaccagcaatagcc
ggtgcgttttcatag
DBGET
integrated database retrieval system
