Zingiber officinale (ginger): 121982144
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Entry
121982144 CDS
T08725
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121982144
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121982144
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
Motif
Other DBs
NCBI-GeneID:
121982144
NCBI-ProteinID:
XP_042390993
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All DBs
Position
5A:141275397..141278533
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AA seq
467 aa
AA seq
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MAAASSSVPCFGIRGEDELSEQQSSAAAASAPAAPKKKRNQAGNPNPDAEVIALSPKTLL
ATNRFVCEVCGKGFQREQNLQLHRRGHNLPWKLKQRNPKEARRRVYLCPEPSCAHHDPSR
ALGDLTGIKKHYCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTPFSRRD
SFITHRAFCDALAQETARLPHSISAVGAAGGGGSGGHLYGNSVGAGGINLDLVPPANPQF
GHLSTATGSSLFRPTQSYHAGAGFGHDLNSLIQDMQSNIDSSPGSLYNLSFFSNNAAAGG
AGGAHHLLLPSDQFHNSRSAGSLFPGISMSNDDASPFLAVGATEPPAAALAPQMSATALL
QKASQMGAATQNSRGSLLAGAAYHSDTSRAQQVDTGRTFQTLMESLSGGVYGNNNANVVD
DAAKLHHAAGRGTPAADNGLTRDFLGVANLCVLESEMKSAFSRRSNP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcttcttcgtcggttccttgctttggaattagaggggaagacgagctcagc
gagcaacagtcgtcggccgcagctgcttctgcaccagctgctcctaagaagaagcgaaat
caggctggaaatccgaatccggacgcggaggtgatcgctctgtcgccgaagacgctcctg
gcgacgaaccggttcgtctgcgaggtgtgcggcaaggggttccagcgggagcagaacctg
cagctgcaccggcgggggcacaacctgccgtggaagctgaagcagaggaacccgaaggag
gcgcggcggcgggtctacctctgccccgagccctcctgcgcgcaccacgacccctcccgc
gccctcggcgacctcaccggcatcaagaagcactactgccgcaagcacggcgagaagaag
tggaagtgcgacaagtgctccaagaagtacgccgtccagtccgactggaaggcccactcc
aagacctgcggcacccgcgagtaccgttgcgactgcggcactcccttttccaggcgcgat
agcttcatcacgcacagagccttctgcgacgcgctggctcaggagacggcgaggctcccc
cacagcatttccgccgttggagcagctggcggtggaggaagcggcggacacttgtatgga
aacagtgtcggcgccggggggatcaatttggaccttgttcctccggcgaatccacagttc
ggccacttgagcactgcgaccggctcgtccttgttccggccgacgcaatcctaccatgcc
ggcgctggattcggccacgacttaaatagcttgatccaagacatgcagagcaacatagat
tcctcgccgggaagtctttacaacctcagtttcttctccaacaacgccgcagccggtggt
gccggcggcgcccatcacttactgctcccttccgatcaattccacaattcaaggtccgcc
ggcagtcttttccccggcatcagcatgagcaacgacgacgcctctccttttctcgcggtt
ggagccaccgagcccccggccgcagcgctggcgccgcagatgtccgccaccgcgctgctt
cagaaggcctcgcaaatgggcgccgcgacgcagaacagccgcggatccttgctcgccggc
gccgcctaccactcagacacgtcgagagcgcaacaggtggacaccggcaggacctttcaa
accctaatggagtccctaagcggcggtgtatacggcaacaacaacgctaacgtggtagac
gatgccgccaagttgcaccacgccgccggcaggggcacgcctgctgccgacaacgggctg
acgagggacttccttggcgtcgccaatttatgcgtgttggagtcggagatgaagtcggct
ttttccaggaggagcaacccgtga
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