Zingiber officinale (ginger): 121982168
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Entry
121982168 CDS
T08725
Name
(RefSeq) COP9 signalosome complex subunit 4-like isoform X1
KO
K12178
COP9 signalosome complex subunit 4
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121982168
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
121982168
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GFIT
Motif
Pfam:
PSMD12-CSN4_N
PCI
DUF6584
CSN4_RPN5_eIF3a
Motif
Other DBs
NCBI-GeneID:
121982168
NCBI-ProteinID:
XP_042391045
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Position
5A:142230590..142262495
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AA seq
398 aa
AA seq
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MESALATAASIADQRQKIEQYKLILASVLSSSNDVSQAKRFIDHMVSDEVPLVVSRQLLQ
TFAQELGRLEADIQKEIAHYALAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQML
SGIDLDSGIRMLDDTYKLSKCVQITRLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQY
KVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEINEEALEQALSAAVTCTILAAAGP
QRSRVLATLYKDERCSKLKIYPILQKVNLERILRKPEIDAFAEELKAHQKAFLPDNFTVL
DRAMIEHNLLSASKLYTNISFEELGALLGIPPQKAEKIAARMIYEDRMKGSIDQVEAVIH
FEDDTEELQQWDQQIAGLCQAFNDILDDLTSKGISVPV
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgccctcgccaccgccgcttccattgcggaccaaaggcaaaagattgaacag
tacaagctcattcttgcatcagttctctcctcttccaacgacgtctcacaagccaagcgt
ttcatcgatcatatggtgtcggacgaggttcctctggtggtctccaggcaattgctccaa
accttcgcccaggagttgggaaggctagaggcagacatccagaaggagatcgctcattat
gctctagctcagattcagccgagggttgtgtctttcgaggaacaggtgttgatcatcaga
gagaaattggctgaactctacgagtctgaacaacagtggtcaaaagcagcacaaatgttg
agtgggattgatctcgattctggaattaggatgcttgatgatacttataagctctcaaaa
tgtgtccaaattactcgcctttatcttgaggatgatgatgctgttaatgctgaggctttt
attaacaaagcttctttcctagtcagcaatagtcagcatgaagtgctgaacttacagtac
aaggtttgttatgctaggatactggatttgaagagaaagtttttggaagctgcacttcgt
tattatgatatttcccagattgagaaacgccaaattggtgatgaggagatcaatgaggaa
gcactggaacaagctcttagtgctgctgtgacatgcacaatattggctgctgctggacct
cagcgatcccgtgttcttgctacactgtacaaggatgagaggtgctcaaagctgaaaatt
tatcctattctccagaaggtgaatcttgagagaattttgaggaaaccagaaattgatgct
tttgctgaggagctgaaagcacatcagaaagcttttttaccagataactttactgtgtta
gatcgggcaatgattgagcacaatctcctgagtgccagcaaattatatacaaatataagt
tttgaggaattaggagctttattaggaattcctccacagaaggctgaaaagattgcagca
aggatgatctatgaggataggatgaagggatcaatcgaccaagtagaagccgtcattcat
ttcgaggatgatactgaggagttgcaacaatgggatcaacagattgctggattatgccaa
gcatttaatgacattcttgatgatttgacaagtaagggcatatcggtgccggtctga
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