Zingiber officinale (ginger): 121982221
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Entry
121982221 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS 2-like
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121982221
03036 Chromosome and associated proteins [BR:
zof03036
]
121982221
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121982221
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121982221
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
121982221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
PHD
RING_XB3-XBAT31
zf-RING_5
TRAF3_RING
zf-RING_4
Prok-RING_1
zf-RING_15
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
121982221
NCBI-ProteinID:
XP_042391121
LinkDB
All DBs
Position
5A:complement(144878347..144893336)
Genome browser
AA seq
674 aa
AA seq
DB search
MALDLPCDGDGVCMVCKVAPPEAELVLCRTCVSPWHAQCLSKPPESMAVVAQWLCPDCNP
PEEGLTAAPVSGNAELIAGIRAIDADQMLTEAEKARQRQALVGGGKAAVAESDEEEEEDQ
KASRGKGIGSVLDLLDEKFNCSFCMQLPERPVTTPCGHNFCLKCFQRWVGQGKLTCAKCR
SPIPSKMAEQPRINSAVVAAIRMAKAAKCNMSAGPTAVYHFIRNENRPEKAFTTERAKRA
GKANACSGQIFVTVPPDHFGPILAENDPKRSQGVLVGETWEDRMECRQWGAHLPHVAGIA
GQSDYGAQSVALSGGYKDDEDHGEWFLYTGSGGRDLSGNKRTNKEQAFDQKFEKLNAALK
ASCLKGYPVRVVRSHKEKRSSYAPEIGVRYDGIYRIEKCWRKVGVQGFKVCRYLFVRCDN
EPAPWTSDDHGDRPRPLPPIKELKNATDVIERKESPAWDYNEKHGWKWMKPPPVSRKPIT
TGNLDESKSVKKARKVAQNMSVKEMVLKEFSCLLCRKVMSLPLTTPCGHNFCKSCLLDAY
ADKSFVRERTREGGRTLRAQKIVKKCPFCPSDISEFLQNPQVNRELMQLIESLQQKTEAQ
EDENSEVAEMSSEDGLEVIEEKNPVESVDGNSDVNAANSETEASIAIQTSRKRKCSVLSV
VAEVLNEEITSVDA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgatctcccctgcgatggcgatggcgtctgcatggtctgcaaggtggctccc
cctgaggcggagctcgtgctctgccgcacctgcgtctcgccgtggcacgcgcagtgcctc
tccaagccgcctgagtccatggccgtcgtcgcgcagtggctttgccccgactgtaacccg
cccgaggagggcctcaccgctgctcccgttagcggcaacgctgaactcatcgctggaata
agggctattgacgccgaccaaatgctaacggaggcggagaaggccaggcagaggcaggcc
ctcgtcggcggaggtaaggccgccgtagcggagagcgatgaggaggaagaagaggaccag
aaggcgagtagagggaaagggattggaagtgttctcgacttgctcgacgagaagtttaac
tgctccttctgcatgcagctgcccgaacgccctgtcactacaccatgtggtcataatttc
tgtttaaaatgcttccaaagatgggttggtcagggtaaactcacttgtgccaagtgtcgt
tctccaatcccgtccaaaatggcagaacaacctagaatcaactctgctgttgttgctgca
attcgtatggcaaaggctgcaaaatgcaatatgtctgctggtccaacagctgtatatcat
ttcatacgaaatgagaacagacctgaaaaagcatttaccactgaacgagctaagagagct
gggaaagccaatgcttgtagtggacaaatctttgttactgttcctcctgatcattttggc
cctatactcgcagaaaatgatccgaaaagaagccaaggtgttttggttggtgagacatgg
gaagatagaatggaatgcagacaatggggtgctcatttaccccatgtggcaggtattgct
ggccagtctgattatggtgctcagtcagttgcactttctggtggatacaaagatgatgaa
gatcatggagaatggttcctttataccggcagtggcggaagagatttaagtggaaacaaa
cgcacaaacaaggaacaggcctttgatcagaaatttgagaaactcaatgcagcattaaaa
gctagttgcctcaaaggatatcctgttcgagtggtgaggtctcacaaggaaaagcgctcg
tcgtatgctcctgagattggtgttcgctatgatgggatatacaggattgaaaagtgttgg
aggaaggttggagttcagggtttcaaggtatgcaggtatctttttgttcgatgcgataat
gaacctgcgccatggacaagtgatgatcatggtgatcggcctcgtcctttgcctcccatt
aaagaactaaagaatgcaactgatgtcatagaaaggaaggaaagtccagcatgggattat
aatgagaaacatggatggaaatggatgaaacctccaccagtcagtagaaaacctataacc
actggaaatctagatgaaagcaagtctgtaaagaaagcaagaaaggtagcacagaatatg
tctgtaaaagagatggttttgaaagagtttagttgcctactgtgtcggaaagttatgagt
ctgccacttaccactccttgtgggcataacttttgcaagtcttgcttgcttgatgcatat
gctgataagtcatttgttcgagaaaggactcgtgaaggtggccgtaccctcagagcacag
aaaattgtcaaaaagtgtcccttttgtccctctgatatatctgaatttttgcaaaatcct
caggtaaatagggagttgatgcagttgattgaatcacttcaacaaaagactgaagcacaa
gaggatgaaaatagtgaggttgctgaaatgtctagcgaagatggcctcgaagtcattgag
gaaaagaatcctgtcgagtctgttgatggcaattcagatgttaatgcggccaactctgaa
actgaagctagcatagcaattcaaacatcacgaaagcgaaaatgttcagttctatcagtt
gttgctgaggtccttaacgaagaaatcaccagtgtggatgcgtaa
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