Zingiber officinale (ginger): 121982508
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Entry
121982508 CDS
T08725
Name
(RefSeq) truncated transcription factor CAULIFLOWER A-like isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121982508
Transcription factors [BR:
zof03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
121982508
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GFIT
Motif
Pfam:
K-box
SRF-TF
AvrLm4-7
Het-C
Motif
Other DBs
NCBI-GeneID:
121982508
NCBI-ProteinID:
XP_042391560
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Position
5A:151311384..151317626
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AA seq
247 aa
AA seq
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MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVAVIIFSAKGKLYEYSTD
SSMKNILERYEQYCYAEKALVSSELECQGNWHQECVKLKAKFEVLSKSQRHLMGEQLDSL
TLKELQQLENQLDNSLKHIRSRKNQVMSDSIAELVRKEKALQEQNKHLEKQIMEKQKAVA
LTQQLHWEQAQTRTSSPPPAFFMTDHTNHGLNIGCYQGRTAMEEAVGAQVQINSSMLPPW
MLTHLNG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggggagggggagggtgcagttgaagcggatcgagaacaagatcaaccggcaggtgacg
ttctcgaagcggcggtcggggttgctcaagaaggcgcacgagatctcagtcctctgcgac
gctgaggtcgccgtcatcatcttctccgctaagggcaagctctacgagtactccaccgac
tccagtatgaaaaacattcttgaacgttacgaacaatattgttatgcagaaaaggcactt
gtatcatcagaacttgaatgccagggtaattggcatcaagaatgtgtcaaacttaaggct
aagtttgaggttctaagtaaaagtcaaaggcatctcatgggagaacaacttgactccttg
acccttaaagaactccagcaactggaaaaccaactagacaattctttgaagcatattcgg
tcaagaaagaatcaagtcatgtctgattctattgcggagcttgtgaggaaggaaaaggca
ctgcaggagcaaaacaaacatctagagaagcagatcatggagaagcagaaggcagtggct
ctcacccagcaactgcactgggaacaagcccagacaagaacctcctctccaccaccagcc
tttttcatgactgatcatactaaccatggcttaaatattggatgctatcaaggaaggaca
gccatggaagaagctgtgggggctcaggttcagatcaacagcagcatgctaccaccatgg
atgctgacccatttgaatgggtag
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