Zingiber officinale (ginger): 121982604
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Entry
121982604 CDS
T08725
Name
(RefSeq) protein YABBY 2-like
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121982604
Transcription factors [BR:
zof03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
121982604
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YABBY
YABBY_N
Zn_ribbon_12
HMG_box_2
HMG_box
Ccdc124
zf-LSD1
Zn_ribbon_Com
Motif
Other DBs
NCBI-GeneID:
121982604
NCBI-ProteinID:
XP_042391677
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Position
5A:complement(7176853..7179026)
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AA seq
174 aa
AA seq
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MSAQALPEHICYLHCHFCSTLLVVSVPGNSLVNITNIVTVRCGHCSNLLSVNLGALLHTL
PSHDHLQRGSMQQEQRMECGSTSLEPMLPISPPEKRQRVPSAYNKFIKEEIQRIKANNPD
ISHREAFSTAAKNWAHFPHIHFGTTFDGDKQEDDQVDEPVVAPAGDQLGHQSFF
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccaagctttgcctgagcacatttgctatctccactgccacttctgcagcacc
ctccttgtggtaagtgttcctgggaacagcttggtgaacatcactaacattgtgacagtc
agatgtgggcactgttctaacttgctgtctgtcaaccttggagccttgcttcacactctc
ccttcgcatgatcatctccagagaggaagcatgcaacaagaacaaagaatggaatgcggt
tcaacttccttagaaccgatgctccccatcagcccaccagagaagaggcagcgtgtgcct
tctgcatataacaagtttatcaaggaggaaatacaaagaataaaggctaacaatccagac
atcagccacagagaagctttcagcactgcagcaaagaattgggctcactttcctcacatc
cattttgggacaacattcgatggcgataaacaagaggatgatcaggtggatgaaccggtg
gttgcaccggcaggagaccagttaggtcatcagagtttcttctga
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