KEGG   Zingiber officinale (ginger): 121983319
Entry
121983319         CDS       T08725                                 
Name
(RefSeq) SKP1-like protein 1B isoform X1
  KO
K03094  S-phase kinase-associated protein 1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03083  Polycomb repressive complex
zof04120  Ubiquitin mediated proteolysis
zof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121983319
   04120 Ubiquitin mediated proteolysis
    121983319
  09126 Chromosome
   03083 Polycomb repressive complex
    121983319
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    121983319
   04121 Ubiquitin system [BR:zof04121]
    121983319
   03036 Chromosome and associated proteins [BR:zof03036]
    121983319
Membrane trafficking [BR:zof04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    121983319
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     121983319
   Cul7 complex
     121983319
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     121983319
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     121983319
SSDB
Motif
Pfam: Skp1 Skp1_POZ zf-C3HC3H_KANSL2
Other DBs
NCBI-GeneID: 121983319
NCBI-ProteinID: XP_042392191
LinkDB
Position
5A:complement(140441184..140446029)
AA seq 155 aa
MATSKKITLLSSDGEAFEVDAAVAMVSKTIEHMVEFDCAEDTIPLPNVTSRILVKIIEYC
QKHVLDDPAKSSDDKEKLKSWDDKFVKVDRDTLFELMLAANYMDIKGLLNLSCQSIADMI
IGKTPEEVRKMFNIKNDFTPEEEEKIRRENQWAFE
NT seq 468 nt   +upstreamnt  +downstreamnt
atggcaacaagtaagaagatcaccttgttgagctccgacggcgaggcgtttgaggtggac
gctgcggtggccatggtgtccaagaccatcgagcacatggtcgagttcgactgtgcagag
gacacgatccccctccccaacgtcacctccaggatccttgtcaagatcattgagtactgc
cagaagcacgttctcgatgatcctgccaagtcgtccgatgacaaggaaaaactcaagtct
tgggatgacaaattcgttaaagtcgaccgggacaccctattcgaacttatgttggctgca
aattacatggacattaaggggttgctgaatttgtcatgccaaagtatagctgatatgatt
attggaaagactcctgaagaagttcgtaagatgttcaatatcaagaacgacttcacccct
gaagaagaggaaaaaattcgtagggaaaatcaatgggccttcgaataa

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