Zingiber officinale (ginger): 121983363
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Entry
121983363 CDS
T08725
Name
(RefSeq) transcription factor-like protein DPB isoform X1
KO
K04683
transcription factor Dp-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121983363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121983363
03036 Chromosome and associated proteins [BR:
zof03036
]
121983363
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
121983363
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
121983363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Pih1_fungal_CS
Motif
Other DBs
NCBI-GeneID:
121983363
NCBI-ProteinID:
XP_042392236
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All DBs
Position
5A:complement(147447215..147451560)
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AA seq
272 aa
AA seq
DB search
MHVNHSSEISLAVTDTEMSTNCKNTTNLDDLCEQEDKKIEASVSPVEEKRKAPRIKGWGL
RKFSTIVCDKVKEKGRTTYNEVADEIICDLSSMEKKDTKFDEKNIRRRVYDAFNVLMAIN
VIAKDKKEIIWVGFPCNGLDKLAKTEERRKLLLKIQEKANSLRELENKYRDISNLIRRNQ
LSHKLGSASSDGIALPFLLVRTNPKATVEIEISEDMRMVNFDFHGAPFHLHDTDSILKAM
RCARSSEQDQNLADTLTEQKSQQQQSALVPRD
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgaaccatagcagtgagatttctttagcagttactgatacagagatgagcaca
aattgcaagaatactacaaatctggatgacttgtgcgagcaagaagacaagaaaatagaa
gcttctgttagtcctgttgaagaaaagagaaaagcaccaaggatcaaagggtggggcctt
agaaagttcagtacaatagtgtgtgataaggttaaggagaagggaagaactacttataat
gaggttgcagatgaaataatttgcgacttatcatccatggagaaaaaggatactaagttt
gatgagaaaaacatacgaaggagagtttatgatgcatttaatgttttgatggcaattaat
gttattgcaaaagacaaaaaggagataatttgggttggttttccttgcaatggacttgac
aagttggcaaaaactgaggaaagaagaaaattgttacttaagatccaagaaaaagcaaat
tctttacgagagttggagaacaagtatagagatatcagcaatcttatacgccggaaccaa
ctgtcacacaagttagggagtgcttcttccgacggaatagctctaccatttttgttggtt
cggacaaatcctaaggccacagtagagattgagatctcagaagacatgcgaatggtgaat
ttcgacttccacggagcacccttccacttgcatgatactgattcaattctcaaagctatg
cgatgcgccaggtcttctgaacaagatcaaaacttggcagatactttgacggaacaaaaa
tctcagcagcagcagtctgcattggtgccaagggattaa
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