Zingiber officinale (ginger): 121983791
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Entry
121983791 CDS
T08725
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00450
Selenocompound metabolism
zof00970
Aminoacyl-tRNA biosynthesis
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
121983791
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121983791
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
121983791
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
121983791
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
121983791
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class I (U)
121983791
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
121983791
Prokaryotic type
Other AARSs
121983791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
C1_1
Motif
Other DBs
NCBI-GeneID:
121983791
NCBI-ProteinID:
XP_042392341
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All DBs
Position
5B:315455..321722
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AA seq
800 aa
AA seq
DB search
MDDTPAPDSPKLPIPGRRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNTI
YICGTDEYGTATETKAMEENCSPEEICDKYHAIHKDVYKWFDISFDEFGRTSSPQQTQVC
QSIFQKLMENNWLSENTIQQLYCDSCQRFLADRLVEGTCPTLDCHYGSARGDQCEKCGKL
LNPTELIDPKCKVCQNTPHVRDTDHLFLELPLLRGKLEEYIDAMLVVGSWSQNAVQATNA
WLKEGLKPRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYISITACYTSEWEKWWKNPE
NVELYQFMGKDNVPFHTVMFPSTLLGTGEKWTMMKTISVTEYLNYETGKFSKTKGIGIFG
NDAKETNIPAEVWRYYLLTNRPEVSDTLFTWVDLQAKLNSELLNNLGNFVNRVLSFIAKP
EGSGYNSFVPDAPDAELHDLTKDVGEKVGKLVYQYLDAMEKVKLKQALRIAMSISSEGNA
YLQESQFWRLYKEDPTSCAIVMKTSAGLVYLLAALLEPFMPSISKEVLKQLNLPPASLLS
FYYDNGISNIGKMPWQFLPSGLCIGKPEPLFKELKDEDVEYFRARFSGSQAERRKAEADA
NKIAEQLKNTNITETSAKKHQSKSGHKTKAEAAEADSSISKLDIRVGIIRKAQIHPDADN
LYVEEIYVGEESTRTVVSGLAKCIPLQQLENRKVCVLCNLKPATMHGIKSHAIVLTASSD
DNTKMELVDPPAAAAVGEPVTFPGYSNEPESISSAKSKVWEKVQADLHTDSALVACYRDV
PFTTSAGVCKVATIANGVIR
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggatgacactccagctccggattcaccgaagctgccaatccctggtcgccggaacatc
ctcatcacgagcgccctcccctacgtcaacaacgtccctcacctcggcaacatcattgga
tgcgttttgagcgcggatgtgtttgctcggtactgccgcctaaggggttataacaccata
tacatctgtggcacggatgagtacgggacagcaacagagacgaaggctatggaggagaat
tgctctcctgaggaaatttgtgataagtaccatgcaattcataaggatgtttataagtgg
tttgacataagctttgatgagtttgggcgcacatcctctccacagcagacccaagtctgt
caatcaattttccagaaactgatggagaataactggttgtccgagaatactatacagcag
ctttattgtgattcatgtcaacgtttcttagctgatcgtcttgtggagggaacatgtcct
acactagactgtcattatgggtctgcacgtggtgatcagtgtgaaaagtgtggaaaatta
ttaaatcctactgaactaatagatccaaaatgcaaggtttgccaaaataccccacatgta
cgtgatacagaccatttgtttctagagctacctttattaagagggaaattggaagaatat
attgatgctatgttggtagttggctcgtggagccaaaatgctgttcaagcaacaaatgca
tggctgaaggagggcttgaaaccgcgctgcatcactagggatctaaaatggggggttcct
gtaccacatgaaaaatataaagataaggttttctatgtgtggtttgatgcaccaattgga
tatatctcaatcactgcatgctacacttctgagtgggagaagtggtggaagaatcctgaa
aatgtagagttgtatcaattcatggggaaggataatgtgccatttcacacggtaatgttt
ccttccactctacttggaactggagaaaagtggacaatgatgaagaccatcagtgtgacg
gaatatttaaattatgaaacaggaaagttttctaaaactaagggcataggaatttttggt
aatgatgcaaaggaaacaaatattccagcagaagtatggagatattatttacttaccaat
aggcctgaggtatctgacaccttatttacatgggtagacttgcaggctaagctgaatagc
gaattgctcaataatctgggaaattttgtgaatcgtgtattgagctttattgctaaacct
gaaggatcaggatataattctttcgttcctgatgcgccagatgcagaattacacgatcta
accaaagatgtaggagaaaaagttggtaaattggtttatcaatatcttgacgctatggaa
aaggtaaagttaaagcaggcattgaggattgctatgagcatatctagcgaaggaaatgca
tatctgcaagagagccaattttggaggctttacaaagaagatcctacttcttgcgccatt
gtgatgaagacatcagctgggcttgtctaccttcttgcagctttgctagaaccctttatg
ccttctatctctaaggaagtgctaaagcaactaaatttaccacctgcatcacttctctca
ttctactacgacaatggaatatcaaatattgggaaaatgccttggcaatttctaccttct
ggactctgtatagggaaacctgagccactatttaaggaacttaaagatgaagatgtagag
tattttcgggcaagattttcaggtagccaagctgaaagaaggaaagcagaagctgatgca
aataagatagctgaacagttaaagaacaccaatataacagaaactagtgcaaagaaacac
caaagcaaatcaggtcacaagacaaaggcagaggctgcagaagctgattcatccatttca
aaactcgacatccgagtgggcatcataagaaaagctcagatacatccggatgctgacaac
ctttacgtggaagaaatttatgtgggcgaggaatcaacaagaacagtagttagtggacta
gccaagtgcattccccttcaacaattggagaaccgcaaggtttgtgttctttgcaacttg
aaaccagcaacaatgcatggcattaaatctcatgccatcgtcctgactgcatcaagtgat
gacaatacaaagatggaattggttgatccgcctgcggcagctgcagtgggcgaaccagtg
actttccctggatactccaatgaaccagaaagcatatcaagtgcaaagagcaaggtgtgg
gagaaggtgcaggcagatttgcatacagattcagcactggtggcctgttacagggatgta
cccttcacaacatcggctggggtatgcaaggtcgcaaccatcgccaatggcgtaataaga
tag
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