Zingiber officinale (ginger): 121983797
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Entry
121983797 CDS
T08725
Name
(RefSeq) protein FORGETTER 1-like isoform X1
KO
K26273
protein strawberry notch
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
121983797
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121983797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
Zn_ribbon_FGT1_1
Zn_ribbon_FGT1_2
SBNO
PHD
ResIII
DUF349
IBR_1
PHD_4
Motif
Other DBs
NCBI-GeneID:
121983797
NCBI-ProteinID:
XP_042392350
LinkDB
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Position
5B:complement(352328..376337)
Genome browser
AA seq
1253 aa
AA seq
DB search
MGQPSLPTVPPLALPPPGPPAGSLQVRCAGCHGILAVAPGMTEFICPKCQLPQMLPPELL
GAPPPRRPPPKAQGIDPTKIQLPCARCKAILNVPHGLARFNCPQCGVDLAVDLAKLQQYF
PSVSSPASLVGFPPDPPEEINEVAIDVEREEDEGGAIGETFTDYRPPRLSVGCPHPDAVV
ETSSLSAVQPPEPTYHLKIMDELDKSNALSCLQIETLVYACQRHLHYLQNGARAGFFIGD
GAGMGKGRTIAGLIWENWQHGRCKALWVSVGSDLKFDARRDLDDVGASCIEVHALNKLPY
SKLDSKAVGIKDGVVFLTYSSLIASSEKGRSRLVQLLQWCGSDFDGLVVFDECHKAKNLI
PEAGSQPTRTGEAVLEIQARLPEARFVYCSATGASEPRNMGYMVRLGLWGAGTCFPQFQD
FLGALDKGGVGALELVAMDMKARGMYVCRTLSYKGAEFEVIEAPLEEGMMDMYKKAAEFW
AELRVELLSANTFLSEEKPNSSQVWRLYWASHQRFFRHMCMSAKVPAAVRLAKQALAEGK
CVVIGLQSTGEARTEEFVTKYGLELEDFVSGPRELLLKLVEENYPVPPKPDSLGEESVKE
LQRKRHSATPGVSFKERQRKTAKWNVTSDTDSFEESLSESDLESTESDEEFQICEICNSE
EDKKLLLRCSCCARLVHPGCLVPPWTDLVSDDWSCYSCKEKTDEYFHARDAYVAELMKRY
EASLERKTKILDIIRSLDLPNNPLDDLIDKLGGPENVAEMTGRRGMLLRASGGKGVIYQA
RSTKEVAMEMVNMHEKQLFMDGKKLVAIISEAGSAGVSLQADRRTLNQKRRVHITLELPW
SADRAIQQFGRTHRSNQASAPQYRLLFTYLGGEKRFASIVAKRLESLGALTQGDRRAGLS
LSAFNYDNNYGKKALMMMYRGIMEQDPLPVLPPGCSSEEPATIQEFITYAKAALISVGIV
RDTVICSGKDGGKVSGRIVDSDMHDVGRFLNRILGLPPDIQNRLFELFVSILDLTVHNAR
NEGQFDSGIIDIKANSIELQGSPRTVHVDNLSGASTVLFTFSVDRGITWESAKSLLEERQ
KDGVACANDGFYESRREWMGRKHFILALECSGSGGTYKIFRPAVGEALREMLAAELKSKY
KKLSTIEKANKGWQDEYEVSSVQCMHGPKCKLGTYCTVGRRLQEVNVLGGLILPVWSTIE
KALSKQVRQSHRRTRVVRLETTTNCQRIVGLLIPNAAIESVMEDLSGFQDVES
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggggcagccctcgctcccgacggtgccgcctctggctctgcctccgccggggccgccg
gcgggaagcctccaggtccgctgcgccggatgccatgggatactcgcggtggcaccgggg
atgaccgagttcatctgccccaagtgccagctgccgcagatgctgccgcctgagctcctg
ggcgctccccctccccgccgccccccgcccaaggctcagggcatcgatcccaccaagatc
cagctgccctgcgctcgttgcaaggcgatccttaatgtccctcacgggctcgcccgtttc
aactgcccgcagtgcggtgtggacctcgcggtcgacctagccaagctgcaacaatacttt
ccctctgtttcgtctccggcctccctagttggattcccaccagacccgcctgaggagatc
aatgaggttgcaatcgatgtggagcgtgaagaagatgagggtggtgctatcggggagacc
tttactgactatagacctcctagattgtctgttgggtgtccccatccagatgctgttgtt
gaaacgtcttcgttgtcagctgttcaacctccagaacccacataccatctaaagattatg
gatgaactggacaaatcaaatgcactgtcatgcttacagattgaaactctagtgtatgct
tgtcagcggcatcttcactatcttcaaaatggtgctagagcaggttttttcattggtgat
ggagctggtatgggtaagggtcgtactattgctgggttgatctgggaaaactggcaacat
gggaggtgcaaagcactgtgggtttctgttggttcggacctaaagttcgatgcacgcaga
gacttggatgatgttggggcttcttgtattgaagtacatgctttaaacaagcttccctac
tctaagctcgactccaaagctgttggaataaaggatggggtagttttcttaacatacagt
agcttgatagcatcatctgaaaaaggtcgatctcggttggtgcaattgttgcaatggtgt
gggtcagactttgatggcctagtggtgtttgatgagtgtcataaggcaaaaaatttgatc
cctgaggcaggaagccaacctactcgaacaggcgaagcagtgttagaaattcaggcaaga
ctacctgaggctcgatttgtttattgctctgcaactggtgcttctgagccacgaaatatg
ggttacatggtccgtcttggactatggggtgctggaacatgtttccctcagtttcaggat
tttttaggggctcttgataaaggtggtgttggagcacttgaactagttgcaatggacatg
aaggcaaggggcatgtatgtttgtcgtacgcttagttacaaaggggctgaattcgaagta
atagaagcaccactcgaggagggaatgatggatatgtataagaaggccgctgagttctgg
gctgaattacgggttgaattgttgtcagcaaacacttttctttcagaggagaaaccgaac
tctagtcaggtttggcgactgtattgggccagccatcagcgtttctttaggcatatgtgt
atgtcagctaaagtacctgctgctgtgaggttagctaagcaggcactggcagagggtaag
tgtgttgtgattggccttcaaagtactggggaggctcgaactgaggaatttgttacaaaa
tatggtcttgaattagaagactttgtctcgggtcctcgtgagctgcttcttaaattggtg
gaagaaaactatccagtacctccaaagccagattcacttggtgaagaaagtgtcaaggaa
cttcagcgtaagcggcattctgctactcctggcgtatcatttaaagaaagacaaagaaaa
actgcaaaatggaatgttacaagtgatactgacagttttgaggagtctctatctgagtct
gatcttgaatctacagaatctgatgaggagttccaaatctgtgaaatatgtaacagtgaa
gaggacaaaaagttgttgcttcgttgttcatgctgtgctcgacttgtccaccctggttgt
ttagttcctccatggactgatttagtatctgatgattggtcttgctactcatgcaaggag
aaaactgatgagtatttccatgcaagagatgcctatgttgctgaacttatgaaaaggtat
gaagcttcactggagcggaaaacaaagattttggatattattcggtccttggatttgcca
aataatcctcttgatgatttaattgacaagttaggaggtccagaaaatgtcgctgaaatg
actggtagacgtggcatgcttctaagggcttctggtggaaaaggtgttatttatcaagca
aggagcaccaaggaagttgccatggaaatggttaatatgcacgagaaacagttatttatg
gatgggaaaaaattggttgctataatatcagaagcaggttccgcaggtgtatctttacag
gctgatagaaggacattaaaccagaaaaggagggtacatataacacttgaactaccatgg
agtgctgatcgtgccattcagcaatttggtagaactcatcgctctaatcaggcttctgca
ccacaatataggcttcttttcacttatcttggtggtgaaaagcgctttgcgtcaattgtt
gcaaagaggttggagtctcttggagcactaacacaaggagaccgcagggctggtctatcg
ttgagtgctttcaactatgacaacaactatggaaagaaggctctaatgatgatgtacagg
ggaataatggagcaggatcctttgcctgtactgcctcctggctgttcctctgaggagcca
gcaactattcaagaatttattacctatgctaaagctgctcttatttccgttggtattgtc
agggatacagttatatgcagtggaaaggatggtggaaaggtatctgggcggatagtggat
tctgacatgcatgatgtggggcggttcttaaaccgtattttgggcttgcctccggatatt
caaaacaggttgtttgaattgtttgtaagcattctggatcttactgttcataatgctcga
aatgaaggacaatttgattctggaatcatcgatattaaagctaactctattgaactgcaa
ggatcaccaaggacagttcatgttgataatctttctggcgcttctactgtattgtttaca
ttttctgttgaccgtggaattacttgggagtctgcaaaatctctacttgaagaaaggcag
aaggatggagttgcttgtgctaatgatgggttctatgaatctaggagagaatggatggga
agaaagcacttcatattggcactagagtgttcaggaagtgggggaacttacaaaattttt
cgccctgctgttggtgaagcactaagggagatgcttgcagctgaacttaaaagtaaatac
aaaaagttatctacaattgaaaaggccaacaaaggatggcaagatgaatatgaggtgtct
tctgtgcagtgcatgcatgggcccaaatgcaaactcggtacttattgtacagttggaagg
aggctacaagaagtcaatgttttgggcggtctcattcttcctgtctggagtaccatagaa
aaagcattatctaagcaagttcgtcaaagccataggaggacacgagtagtgcgcctggag
actacaacaaattgccagcgaatagttggccttcttattccaaatgctgcaattgaatca
gtcatggaagatctatcaggttttcaggatgttgaaagttaa
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