Zingiber officinale (ginger): 121983807
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Entry
121983807 CDS
T08725
Name
(RefSeq) protein RIK-like isoform X1
KO
K25780
kelch domain-containing protein 4
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
121983807
Spliceosome [BR:
zof03041
]
Complex B
Other components
Prp19-related factors
121983807
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Gene cluster
GFIT
Motif
Pfam:
KH_12
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
121983807
NCBI-ProteinID:
XP_042392366
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Position
5B:479330..489198
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AA seq
618 aa
AA seq
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MTDDTSPKATADSVVSTTAGRQRKKRKWDQPAEPLVAAGLVASRVPFTSNAILGSTLPGS
FPSSASLSTNQIPMSSVNPLEMVQLPLVTQNAATIIQKLNQPKIQDEVIAREIVINDAEP
TIRYKLTKRQTQEEIQKCTGAVVITRGKYRPPNGFPDYEKPLYLHISAGANIKDIADRIR
AVDHAASMVEEIMQKGQIPLVSSTLHSNFINGEITQNLTTCLFLGFEADPSLNIAARIRG
PNDLYINHIMNETGATVVLRGQASEHLDSSRVEEALQPLHLYLSSSNKKSLEAAKILAEN
LLDTIARECGTSRISSTKVYGAVPPPQQLLVGTESSSKIISAGNSNQAPVFPSTTTGNVA
VTQSFVPSGVASISGSVFQSVEQLKYGNPQSSVSYALPGVSSVTCYNGYEGIYPQTTPLQ
QVALALRQASSSSASVPSMNSLASTTERKPSSAPDADTQPLQKRKFKELSVSSKVSTPLQ
NSQQGSEFLKPGLEDSDAKPLSSMLPPRTMPPPPPKFSSSNSLPKIDNSKTCLVDPSALQ
RASTNMPPPPPRFSKSHLPTGADSVCVDTRKPTVHHLSDTLLKLAEYGDDEEEILDRSVE
LPKSSPFGNSSVKPFWAV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgataccagtccgaaagctaccgcggactccgtggtatccacaaccgctggc
aggcaaaggaaaaagagaaaatgggaccagcctgctgagccactggtagccgctggtctt
gtagcctcaagggtaccatttacctcaaatgctatcttggggtcaactctccctggatct
tttccatcatctgcatctctttcgacaaatcaaattcccatgtcttctgttaatcccctt
gaaatggtacaattgcctttggttacacaaaatgctgctaccattattcaaaagttaaat
cagccaaagattcaagatgaggtaatagcacgggaaattgtgataaatgatgcagaacca
actataagatacaaactcactaaacggcaaacccaagaagagattcaaaaatgcaccggt
gcagttgtcataactaggggcaagtatcgtcctccaaatggttttccagattatgagaaa
ccattatatctccatatttctgctggggctaacataaaagacattgctgatcggattaga
gcagtcgatcatgcagcttcaatggttgaggagatcatgcaaaaaggccagattcctctt
gtatcttctactctccactcaaattttataaacggagagattactcaaaatctcactaca
tgtttatttctgggctttgaggctgacccttcattgaacattgcagctcgaatacgtggt
cctaatgacctctatatcaatcacattatgaatgaaacaggagctactgttgtacttaga
ggacaagcatctgaacatcttgatagttctcgtgttgaagaagcattgcaacccttgcat
ttatatctgtcaagttctaataaaaaaagtcttgaagctgcaaagatcttagcagaaaac
cttttggatacaattgccagagaatgtggcacatcaagaatttcttcaactaaagtttat
ggtgctgtccctccaccacaacaattgttggtgggaacagaaagctcatcgaagatcata
tctgctggaaattccaatcaagcaccagtatttccatcaactaccactggaaatgtggca
gtaacacaatcttttgttcctagtggagttgcaagtatttcaggctctgtttttcaatct
gtagagcagttgaaatatggaaatcctcaaagctcagttagctatgctcttccaggagtc
tctagtgtaacatgctataatggctatgaaggaatatatccccaaaccacaccattgcag
caagttgctttagcacttagacaagcatcatcttcatctgcttctgttccatctatgaat
tctttggcaagcacaactgagagaaaaccaagttcagctcctgacgcagatacacaacct
ctacaaaaacgcaaatttaaggaattatcagtttcttcaaaagtgtcaactccacttcag
aactcacaacagggatcagaatttcttaagccaggtctggaggattcagatgcgaagcct
ctttcatctatgctacctccaaggaccatgccgcctccaccaccaaagttttcgtcatcg
aattcactaccaaagattgacaactcaaagacgtgtttggtagatccaagtgctttgcaa
cgagcttctacaaatatgcctccacctcctccaaggttttcaaaatctcacctgcctaca
ggagctgacagtgtgtgtgtggataccaggaaacctacagtgcatcatctctcagatacg
ctactcaagctcgcagaatatggagatgacgaggaagagatcttggatcgaagtgtagaa
ttgccaaagagctctccatttgggaattcgtctgtgaaaccattttgggctgtatga
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