Zingiber officinale (ginger): 121983825
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Entry
121983825 CDS
T08725
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI2 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121983825
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121983825
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121983825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ariadne
IBR
UBA_ARI1
IBR_2
Rcat_RNF216
IBR_1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
121983825
NCBI-ProteinID:
XP_042392398
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Position
5B:920475..925421
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AA seq
599 aa
AA seq
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MADDEDYPSSSDVDDCYLTDQEDAIEEDVLQGLEDGHEEDCHWSLSSVITKESLLAAQKE
DLRKVMELLVLKEQHARTLLIHYRWDVERIFELLDQKGKDRLFSEAGVTVVENKGFSTSA
NPVTCNVCFETIPTAAITEMDCGHSFCNDCWTEHFIVKINDGQSRRIRCMALKCSAVCDE
AVIRNLVSARCPDIADRFERFLLESYIEDNNKVKWCPSAPHCGNAIRVEGDIYCEVECTC
GIQFCFSCLSEAHSPCSCMMWELWIKKCQDESETVNWITINTKPCPKCHKPVEKNGGCNL
VACICGQAFCWLCGGATGRDHTWSNITGHSCGRFKEDQTKKTERARRDLYRYTHYHNRYK
AHTDSLKQESNLKETIQKKISISENKQSKIKDYSWVMNGLNRLFRSRRVLSYSYPFAFYM
FGDELFKDEMTAEERELKQNLFEDQQQQLESNVEKLSMFLEKDFPSSSDDEVMNIMRHVI
NLSSVVDNLCKQMYQCIENDLLYPLQRATHNIAPYKSKGLERASELCVPWDSDQSSSMKT
SHEAQTDSTPIGTAAVCKFRGSTSSDESRWASHKRPRKDAHGGAPLFDLNMPPEVIDKI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatgaggattatccttcgtcgagcgatgtggacgattgctacctcactgac
caggaagatgccatcgaggaggacgtcctccagggccttgaagacgggcacgaggaggac
tgccactggtcgctgtcgtcggtcatcacaaaagagtccctcctggcagctcagaaagag
gatttgcggaaggtgatggagctgttagtgcttaaagaacagcatgcaaggacccttctt
attcattaccgttgggatgttgagaggatctttgaactgctcgatcaaaaggggaaggac
cgattgttttcagaagcgggcgtcactgttgtggagaacaaaggtttttctacttcagca
aatccagtcacctgtaatgtctgttttgagaccattcctactgctgcaatcactgagatg
gactgtgggcatagcttctgcaatgattgttggactgagcattttatagtgaagataaat
gatggtcaaagccggcgcattagatgcatggccctcaaatgcagtgctgtatgtgatgag
gcggtcataaggaatttagtcagtgcaaggtgtccagatattgctgatcgttttgagagg
tttctacttgaatcatatattgaagacaataataaggttaaatggtgccctagtgctcca
cattgtggaaatgctattcgcgttgaaggtgatatttattgtgaggttgaatgtacatgt
ggtatacagttctgtttcagttgtttgtcagaagcacattcaccttgttcatgcatgatg
tgggagctgtggataaagaaatgccaggatgagtcagaaactgttaattggataacaata
aacacaaagccttgtccaaagtgtcacaagcctgttgaaaagaatggtggttgcaatctt
gttgcctgtatctgtgggcaagcattttgttggttatgtggtggtgctactgggagagat
catacatggtctaatataactggccacagttgtggtcgcttcaaagaagaccaaacaaag
aagaccgagcgtgcaaggcgtgacttataccgctatacacattatcacaatagatacaag
gctcatacagattctctcaagcaggaaagcaatcttaaggaaaccatccagaagaaaatt
tccatttcagagaacaagcaatccaaaatcaaagactacagttgggtgatgaatggactg
aataggcttttcagatcaagacgagttctttcgtattcgtatccatttgccttctacatg
tttggggatgagctctttaaggatgaaatgacggcagaggagcgagagctgaagcagaat
ttgtttgaggatcagcaacaacagctggagtccaacgttgagaagttatctatgttcttg
gagaaggattttccaagctcttctgatgatgaggtcatgaacataatgcgacatgtcata
aatctttctagtgtcgtcgacaatctttgcaaacagatgtatcaatgcattgagaatgac
ttgttgtatcctcttcaacgagcaactcacaacatagctccatataaatcaaaaggcctt
gagagggcgtcagaactatgtgtcccttgggattcagatcaaagttctagtatgaaaact
agtcatgaagcacagacagattcaactcccattggaactgctgctgtatgcaaattccgc
ggttccacaagttcggatgaaagcaggtgggcttctcataaacgacccagaaaagatgct
cacggtggagcgcctctttttgatctaaatatgcctcctgaggtgattgacaaaatctga
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