Zingiber officinale (ginger): 121983858
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Entry
121983858 CDS
T08725
Name
(RefSeq) AMSH-like ubiquitin thioesterase 2
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121983858
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
121983858
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121983858
04121 Ubiquitin system [BR:
zof04121
]
121983858
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121983858
Peptidases and inhibitors [BR:
zof01002
]
Metallo peptidases
Family M67
121983858
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Others
Others
121983858
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
121983858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
OrfB_IS605
Motif
Other DBs
NCBI-GeneID:
121983858
NCBI-ProteinID:
XP_042392449
LinkDB
All DBs
Position
5B:complement(1409608..1416509)
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AA seq
377 aa
AA seq
DB search
MVPSVDDRFPVSFYFRIADQLLKQADVYRKEGNLDCLHLTLNRYVRLVSQVIPQHRNYSK
HSSKEKLRHTKILQESTKEAEKLKLLATTNINSSGSQLGRRSKNSANNFRSTSQRWTKKI
LNFSSFKEGKIGHYDSRTCQRGDDNEVHVVKHYFPSSVVSWVEEGGSSGQVSHVIFPSSN
DGNSKCISEGSSTSDSTKDMHISVKLTEEFLDLAKENTHRDLETCGILGAFLKNHTFYIT
TLIIPKQESTSNSCQALNEEEIYAILDERSLYPAGWIHTHPSQTCFLSSIDLHTQYSYQV
MLPEAIAIVLAPTDPSKGCGIFRLTDPGGIAVLKECNERDFHPHSTTADGSPIYEICSNI
YTNSNLRFEIIDLRISS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggtgccctcggtggatgatcgattccccgtatccttctacttcagaatcgccgaccaa
ctgttgaagcaggctgatgtttatcggaaagaagggaatttagactgtcttcaccttact
cttaaccgttacgtcaggttggtgtcccaggtgattcctcagcatcggaattactccaag
cactcgtcaaaggaaaaacttcgtcatacgaaaattctacaagagtcgaccaaagaggct
gaaaagttgaagttattagctacgactaacatcaattcaagtggttcgcagctaggtagg
agatctaagaatagcgcaaataacttcagatcaacatcgcaaaggtggaccaagaagatt
ttgaacttttctagcttcaaggaagggaagattggacattacgattcaagaacatgtcaa
agaggtgatgacaatgaagttcatgttgtgaagcactactttccttcttctgttgtttct
tgggtagaagagggaggttcttctgggcaagtttctcatgttatttttcccagttcaaac
gatggtaattcaaaatgtatatctgaaggatcttcaacttcagattctactaaggatatg
catatatcagtgaaattgactgaagaatttttggatcttgctaaagaaaacacacatagg
gacttagagacttgcggcattcttggtgcttttcttaagaatcacacattctacattaca
acactaataataccgaagcaggagtcaacttccaattcatgccaggcattaaatgaggaa
gaaatttatgccatattggatgagaggtctctttatcctgcaggatggattcatacacac
ccttcacaaacttgctttctgtcatcgatagatttgcatactcagtactcataccaggtc
atgctacccgaggcaatagcaatcgtcttggcaccaacagatccttcaaagggatgcgga
atatttcgtctgaccgatcccggaggaatcgctgttctgaaagaatgcaacgagagggat
tttcatcctcactctaccaccgccgacggtagtccgatctacgagatctgctccaatatt
tatacaaattcaaacctgcggttcgagatcatcgacctccgaatctcgtcctga
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