Zingiber officinale (ginger): 121983873
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Entry
121983873 CDS
T08725
Name
(RefSeq) myosin-17-like isoform X1
KO
K10357
myosin V
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121983873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121983873
04131 Membrane trafficking [BR:
zof04131
]
121983873
03029 Mitochondrial biogenesis [BR:
zof03029
]
121983873
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zof04812
]
121983873
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121983873
mRNA cycle factors
P-body specific factors
121983873
Membrane trafficking [BR:
zof04131
]
Others
Actin-binding proteins
Myosins
121983873
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121983873
Cytoskeleton proteins [BR:
zof04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121983873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
Myosin_N
IQ
AAA_16
TSC22
Med19
nSTAND3
Zeta_toxin
AAA_22
AAA_18
Flp1_like
Motif
Other DBs
NCBI-GeneID:
121983873
NCBI-ProteinID:
XP_042392477
LinkDB
All DBs
Position
5B:1567011..1586911
Genome browser
AA seq
1525 aa
AA seq
DB search
MASPDNIIVGSHVWIEDPSVAWIDGEVFQISGHKVHVRTTNGKMVVANISKVFPKDTETP
PGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQY
KGATFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKLLMRYLAYLGGRT
GIEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLE
RSRVCQINDPERNYHCFYLLCAAPHEDIKKYKLGSPSSFHYLNQSKCVKLDGVDDAEEYI
AIRRAMDIVGISEQEQEAIFRVVAAILHLGNVDFAKGPEIDSSVIKDEKSRFHLNMTAQL
LMCDARSLENALIKRVMVTPEEIITRTLDPASAIVSRDGLAKTIYSRLFDWLVEKINVSI
GQDPDSKHLIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEID
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKINKRFVKPKL
SRTDFTICHYAGEVTYQANHFLDKNKDYVVAEHQDLLNASACPFVSGLFPPLPEETSKSS
KFSSIGSRFKLQLQALMETLSSMQPHYIRCVKPNNVLKPAIFENFNVIQQLRCGGVLEAI
RISCAGYPTRRSYYEFFHRFALLALEFMEENYDDKIACLKILDKMGLKGYQLGKSKVFLR
AGQMAELDARRAEVLGRAARTIQRQTRTYIARKEFLVLREATIQLQTFCRGQLACKLFEQ
MRREAAALKIQKNYHCYIARKSYLALKTSAVTLQTGLRAMSAHTVFRLKKQTKAAICIQS
CCRSHRDYLYYKRLQKATLTYQCAWRQRLARRELRKLKMAARETGALKEAKDKLEKRVEE
LTWRLQLEKRLRTDLEESKVQEVAKLQSVLSEVQLQLEEAKSMLTRERDAARKAIEEAPP
VIKETTILVQDMEKINSLTAQVEQLKDLLQTEKLESGAAKKAYREAQEKNNELIKKVENA
ETNVNQLQDSIRRLEDKVSNLASENQVLRQQALSISPTSRALVMHPKATIFPRTPENNNV
LHGETKLALDWSPALPNPKNLEIDEKPQKSLSEKQQESQNLLLKCISEELGFSKSRPVAA
CLVYKCLREWRSFEVERTSIFDQIIQAIGSKLEDNINVLSYWLSNTSTLLLLLQRTLKAG
GMGSFTPHRRRTSVPVFGRMSQGIRASPHSAGPLSLNGRMVGGSNDLHQVEARYPALLFK
QQLTAFLEKIYGMIRDNLKKEISSVLGSCIQAPRTSRASLVKGIRSPGNAAAQQALMGHW
QSIVTSLTNYMKPLKANYVPPFLVRKLFTQIFAFINIQLFNSLLLRRECCSFSNGEYIKS
GLTELERWCSDATEEYAGSSWDELKHIRQAVGFLVLHQKPKKALKEITQDLCPVLSIQQL
YRISTMYWDDKYGTRSVSSEIISSMRLMMTQDSNSSSSNSFLLDDDSSIPFSVDDVSKSM
TEIDIADIDPPPFIRQNSGFAFLAQ
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcccagacaatattattgtaggttctcatgtgtggattgaagatccaagtgtg
gcttggattgatggtgaggtatttcagattagtggtcacaaggtccatgtgcgcacaact
aatggaaaaatggtcgtggcaaatatctcgaaggtatttcctaaagatacagaaactcca
ccaggaggagtagatgacatgacaaaattatcatatctgcatgaacctggggttttgcaa
aacctggccacacgctatgagcttaacgaaatctatacatacactggtaatatcctgatt
gcagtgaacccatttcaaaggttgccgcatctatatgacacccatatgatggaacaatac
aaaggagcaacatttggggagctgagtccccatgtttttgctgttgctgatgttgcttat
agggcaatgattaatgaaggaaaaagtaactccatcttggtcagtggtgaaagtggtgct
ggtaaaactgaaacaacaaaactgcttatgagatatctggcatatttaggtggacggaca
ggaattgaaggacggactgtcgaacaacaagttttggagtccaatccagttctcgaggct
tttgggaatgcaaaaactgttcggaacaacaactctagtcgttttggtaagtttgttgag
atccaatttgacaaaaatgggagaatatctggcgctgctattagaacctacttgcttgaa
agatctcgtgtctgccaaattaatgatcctgagagaaactatcactgcttttaccttcta
tgcgctgctcctcatgaggatatcaaaaagtataaattgggaagcccaagctcattccac
tatctaaatcagtccaaatgtgttaaattggatggtgtagatgatgctgaagagtatatt
gcaattagaagggctatggatatagttggaataagtgagcaagaacaggaggcaatcttc
agggttgttgctgctatactccatcttggtaatgttgattttgcaaagggaccagagata
gattcatctgttatcaaggatgagaagtcaagattccatctaaacatgacagctcaactc
ctaatgtgtgatgcccgaagtctagaaaatgctttgattaaacgtgtcatggtgacacct
gaagaaattattaccagaactcttgatcctgcttctgcaattgttagccgagatgggtta
gcaaaaaccatttattcccgcttatttgattggttggtcgaaaaaattaatgtatcaatt
ggacaagacccagattcaaaacatttgatcggagtacttgatatttatggttttgagagt
ttcaaatgtaatagttttgaacagttctgcatcaattttacaaatgaaaaactgcaacaa
catttcaatcagcatgttttcaaaatggagcaagaggagtataccaaggaggaaattgac
tggagctacattgaatttgttgataaccaagatgttctcgacttgattgagaagaaaccc
ggtggtatcattgcccttcttgatgaagcttgtatgtttcccaagtctacacatgagaca
tttgcccagaagttgtatcagacatttaaaatcaacaagagatttgtcaaaccaaagctt
tctcgtacagattttacaatctgccattatgcaggcgaggtaacatatcaagccaatcat
ttcttagacaaaaacaaagattatgtggtggcagaacatcaggatttactcaatgcttca
gcatgtccctttgtgtcgggtttattccctccacttcctgaagaaacatctaagtcatcc
aagttctcttctattggatcacggtttaaattacaacttcaagctctgatggaaactttg
agctctatgcaaccacattatattaggtgtgtgaagccaaataatgttctcaaacctgct
atctttgagaacttcaatgttatccagcaattgcgatgtggaggagttcttgaagcaatc
aggataagctgtgctggttatcctacccgaagatcatattatgaattttttcatcgattt
gctcttcttgcactagaattcatggaagagaattatgatgacaagattgcctgtctaaag
attttggataaaatgggattgaaaggttaccaactaggcaagagcaaggtgtttttgaga
gccggccagatggctgaactggatgctcgaagggcagaagtattaggaagagcagccaga
accatacagagacaaactcggacatatattgctcgcaaggaattccttgtgctacgggaa
gcaactattcaattgcaaactttctgtagaggacaattggcttgtaagttgtttgagcaa
atgaggcgtgaagcagcggcactcaaaattcagaaaaattaccattgttacattgcaaga
aaatcatatttagctcttaaaacttcagcagttacattgcaaacaggcttaagggcaatg
tctgctcacacagtgtttaggttaaaaaaacaaactaaagcagcaatctgcattcagtct
tgttgccgtagtcatagagactatttatattacaagagattgcagaaggccacacttacc
tatcaatgtgcatggaggcaaaggcttgctagaagagagctgagaaaactaaaaatggct
gccagggaaacaggagctctgaaagaggcaaaagacaagcttgagaagcgggttgaggag
ttaacttggcgtttacagttggagaaacgtctaagaactgatctggaagagtcaaaagtg
caagaagtggccaagttacaatctgtgttgtctgaggtgcaactacaacttgaagaggcc
aagtcaatgcttactcgggagcgtgatgctgcacgaaaagctattgaagaagcacctcct
gttattaaagagaccactatcctggttcaagacatggaaaaaatcaactcattaacagct
caagttgaacagttgaaggatttattgcaaacagaaaagctggaaagtggtgcagccaag
aaagcttaccgcgaggcacaagaaaaaaataatgaactcattaagaaagttgaaaatgct
gaaacaaatgttaatcagcttcaagatagtattcggaggcttgaagataaagtatcaaat
ctggcatcggagaatcaagtgcttcgccagcaagcactttccatatcaccaactagcaga
gcattggttatgcatccaaaagcaactatcttccctagaacgccagagaataacaatgtt
ctgcatggagaaacaaaacttgcattggattggagtcctgcattaccaaatcccaagaat
cttgaaattgatgaaaagccacaaaagtcactgagtgagaagcagcaggaaagtcagaac
ttgcttcttaagtgcatctctgaagagctaggattctccaagagtaggcctgttgctgct
tgtcttgtatataaatgtctccgcgagtggagatcttttgaagttgaaaggactagtatt
tttgatcaaataatccaagcaataggctcaaaacttgaggataacatcaatgtattatct
tactggttgtccaatacatctaccctattgctgcttctacaacgcacactgaaagcaggt
ggcatgggaagttttactcctcataggcggagaacatcggttcctgtatttggaaggatg
tctcaaggaattcgagcatctcctcatagtgctgggcctctttccctgaatggtcgcatg
gttggtggatcaaatgacttgcaccaagtcgaagctagatatccagctttgcttttcaag
caacaacttactgcatttcttgagaaaatttatggaatgataagggacaacttaaagaaa
gagatatcttctgtccttggctcttgtatacaggctccaaggacatcccgtgcaagctta
gtcaaaggaatacgttcaccaggaaatgcggcagcccaacaagcccttatgggacattgg
caaagtattgtgacgagtttaacaaactacatgaaaccacttaaagctaattatgtccct
ccattcctagttcggaagttgtttacccaaatatttgctttcatcaacattcaactattc
aatagtcttcttctgaggcgtgagtgctgctcgtttagcaatggggaatatattaaatca
ggacttactgaattagaacgttggtgcagtgatgcaactgaagagtatgcaggttcttca
tgggatgagttaaaacatattaggcaggctgttggattcctggttttacatcagaaacca
aagaaggcactgaaggagataactcaagatttatgcccagttcttagcatacaacagtta
tacagaatcagtactatgtactgggatgacaaatatggcacacgcagtgtttcatcagag
attatttcaagtatgagacttatgatgacccaggactcaaatagttcttccagtaattct
ttcttgttagatgatgactccagcattccattttcggtcgacgatgtctcaaagtcgatg
acagaaatagatatagcagatattgatccaccgcctttcattcgccaaaattcagggttc
gcatttctggcacaatga
DBGET
integrated database retrieval system
