KEGG   Zingiber officinale (ginger): 121983980
Entry
121983980         CDS       T08725                                 
Name
(RefSeq) protein SUPPRESSOR OF PHYA-105 1-like isoform X1
  KO
K16240  protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
zof  Zingiber officinale (ginger)
Pathway
zof04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:zof00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    121983980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zof04121]
    121983980
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    121983980
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Pkinase Beta-prop_WDR41 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N WD40_like Beta-prop_Aladin WD40_RFWD3 PK_Tyr_Ser-Thr
Other DBs
NCBI-GeneID: 121983980
NCBI-ProteinID: XP_042392645
LinkDB
Position
5B:5069964..5080732
AA seq 1065 aa
MEGKTEATENADTGNPNEASHIKNIESDQLPQQDNGKALETSGPEVSQDSDWPEQLSLLQ
SPEMSLQTVSGREFCDNMVNRDHFQRPCTNSRPTNLALKVGELTSKNYKSPNLSLDGCST
SGKSSTMTHLWSNFKMVAGKAKEKTLNEYLQLGNKDAEGRAHLGSIDSSRPLTCMHESKT
LKITENVGAADKHVVVDDSHSRLSFPGSIQSKIFSASGFQQFFNRSFIKGKSLASRHQEN
NDAFVANVHEQNIMRLNTDSKGTSISSHKQGDVTDSMCLLGGGIVAHHEGISLREWLQLK
LQRINRVERMQFFNQILDLVDACHCQGLALQHLQPSYFLVMPLNQVKYIGSFIPLGQKDM
LSVSVEKDVHYASCLGKRKMHIKQSKEPGDCLELKYQKLTNNINACSRHSGFRGKDQSQE
KGNISRSENFRSCLGGLALDKLYTIHRASSCTISQQSMSEFLKLEEGWYASPEELHDHIT
SLSSNIYSLGVLFFELFCHSETWEVHCSAMSDISVRILPSNFLSERPKEAGFCLWLLHPD
PYSRPKLRDIILSDLVKENRELLTIDHSFALTEEEDAEADLLLHFLLLSKEKMEKQVGDL
LANFECIRTDLEKVDGGSLLKVKFSSGGKYLPSSLNYIPESYSHDKTIKHVDELTRSPLS
CLYKERFLKNIDQLENAYFTMRSKKEASGPNSATRTDTDVLKMRDRNFHVQHTAVQETEE
LGTFFDGLYKFAQYNKFKVCGSLKNSDSVHCANVICSLSFDRDEDYFATAGVSKKIKIFE
FSSLLDDTVDIHYPLIEMTNRSKLSCVCWNNYIRNYLASTDYEGVVQLWDASTGQGLTKF
IEHQKRAWSVDFSQVDPAKLASGGDDFSVKLWSTNEKNCIGTIRNVANVCCVQFSPYSSH
LLSFGCANYRIYCFDLRNTRIPWCTLAGHGKAVSYVKFIDAETIVSASTDNSLKIWDLKQ
TNASRLQDSSCKLTLSGHTNEKNFVGLSVLDGYITCGSETNEVYAYYKTFPMPMVSHKFG
SIDPITALETDDDGGQFVSSVCWRGKSNMVVATNSTGSMKVLHLV
NT seq 3198 nt   +upstreamnt  +downstreamnt
atggaggggaaaactgaagcaactgaaaacgcagatactggtaatccgaatgaggcttct
catattaaaaacatagaaagtgatcagctaccacaacaagacaatggaaaagcacttgaa
acatcaggtccagaagtctcccaagactctgattggcctgagcaattgtctctgctgcag
tcacctgagatgagtcttcaaactgtctctggaagagagttttgtgacaatatggtaaat
cgggaccattttcaaaggccgtgtacaaactcacggcctactaacttagcacttaaagtg
ggagagctgacttcgaagaattataagagccctaacttgtccttggatggttgctcaact
agtggaaaatcctccaccatgacacatttatggtcaaattttaaaatggttgctggcaaa
gcaaaggaaaaaacactaaatgagtatttgcaattgggaaacaaggatgctgaaggcaga
gcacatttgggttctattgactcttcaaggccactgacatgcatgcatgaatcaaaaaca
ttgaagataacagagaatgttggagcagctgacaaacatgtggtcgtagatgattctcac
agtagactttcttttcccggaagcatccaatctaagatcttttctgcatctggatttcaa
caattttttaatagaagttttataaagggtaagagtcttgcatctagacatcaagaaaat
aatgatgcatttgttgccaatgttcacgaacaaaatattatgagacttaataccgatagc
aaaggaacatctatttcatcacataagcaaggtgatgtgacagatagcatgtgcctttta
ggtggtgggatagtggctcatcatgaagggattagtttacgtgagtggcttcagcttaag
ttgcaaaggataaacagggttgagaggatgcaattctttaatcagattctggatcttgta
gatgcttgccattgccaaggtctagctttacaacatttacaaccatcatattttcttgtt
atgcctctaaatcaagtcaaatacataggatcttttatcccgctaggacagaaggatatg
ttgtcagtttctgtagaaaaggatgttcactatgctagttgtctgggcaaaaggaaaatg
cacattaaacaaagcaaggagcctggcgattgtttggaactgaagtatcagaaacttact
aataacatcaatgcatgttccagacattctggttttaggggaaaagatcaaagccaagaa
aaaggtaatatttccagatcagaaaatttcagatcttgtttgggtgggctggcattggac
aagctttatacaattcatagagcaagttcatgcaccatcagccaacagtcaatgtctgaa
tttttgaagttggaggagggatggtatgctagtccagaggaattgcatgatcacataact
tctttatcatcaaatatctacagtctcggggttctattttttgagctcttttgccactca
gaaacatgggaagttcattgctctgcaatgtcagatatcagtgttcgaatccttccttca
aattttctatcagaaaggcctaaggaagctggtttctgcctttggttgttgcacccagac
ccttattctcggccaaaattaagggatattattttgagtgacctagtaaaagaaaataga
gaattgttaaccatagatcattcttttgccttgactgaagaggaagatgctgaggctgac
ttgttgttgcattttctcttgttgtcgaaagagaagatggagaagcaggtgggtgatctt
ttagcaaactttgaatgtataagaacagatcttgagaaggttgatggagggtctttgttg
aaagttaagttctcttctggtggcaaatatttgccgtcaagcttaaattatatccctgaa
tcttattctcatgataaaaccataaaacatgtggacgaactgactagatcacccctgtca
tgtctatacaaagaaaggtttttgaagaacattgaccagcttgagaatgcatactttacc
atgagatccaaaaaggaggcatctggacccaattctgcaacccgtacagacacagatgtt
ttaaagatgcgagatagaaatttccatgtccaacacactgctgttcaagagacagaggag
ttgggaacattttttgacggtttatacaaatttgctcaatataataagtttaaagtatgt
ggcagcctcaagaattcagatagtgttcactgtgcaaatgtgatttgttctttgagcttt
gaccgtgatgaggactactttgctactgctggggtatcaaagaaaataaaaatttttgag
tttagctctcttttggatgacacagttgacattcattacccattgattgaaatgacaaat
agatccaagctcagttgtgtatgttggaataactatattcgaaattatttggcatcaaca
gactatgaaggtgtagttcagttatgggatgcaagcactggccaaggtttgacaaagttc
atagagcatcaaaaaagagcttggtcagttgatttctcacaagtagatccagctaaactg
gctagtggaggtgatgacttttctgtgaaactgtggagcactaatgagaaaaattgcatt
ggcaccatcaggaacgtagctaatgtctgttgtgttcagttctctccgtactcctcccat
ctgttgtcttttggctgtgccaattacagaatttactgttttgatctgcgaaatactaga
attccatggtgtacactggctggacatggaaaggctgtcagctatgtgaagttcatagac
gcagaaacaattgtttctgcatcaactgacaactcactcaaaatttgggatctgaaacaa
accaatgcaagcagattgcaagacagttcttgcaagctgaccttgagtggtcatacaaat
gagaagaactttgttggtttgtcggtcttggatggatacataacatgtggttctgaaacc
aatgaagtttatgcttactacaaaactttccctatgccaatggtttctcacaaatttggt
tccattgatccgatcaccgcactggagaccgatgatgatggcggacagtttgtctcaagt
gtttgttggagaggcaaatcaaatatggtggtcgctacaaattccactggcagcatgaaa
gtgctgcacctggtttaa

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