Zingiber officinale (ginger): 121984086
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Entry
121984086 CDS
T08725
Name
(RefSeq) cullin-1-like
KO
K03347
cullin 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121984086
04120 Ubiquitin mediated proteolysis
121984086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121984086
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
121984086
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
121984086
NCBI-ProteinID:
XP_042392805
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Position
5B:complement(9011907..9019907)
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AA seq
733 aa
AA seq
DB search
MAMMWRRKQTPFDEGWKFVEEGITKLKMILKEGLSLPESPITSTEFILLHTSIYNMCSQW
NDYNQEELLYNKYTEVFEEYTTSVVLPSLEEKYNEFMLRELTKQWLNHKYMTKWLSHIFG
YLSRFFIKQRSLPSLNEIALSCFRNQVYQVIKGKVKDAVISLIDQEREGEQIDRALLKNV
IDIFVEIGSEKMDYYENDFEVEMLKDTKTYYSRKASNLIQVESCSNYMLKVEEFFKREKD
RVAHYLHASSELKLLEKVQDEVLVVHSRQLLEKEDSICYFLLQEDRVDDLSRMYRLFSKI
PNGLDLISKIYQKHVIAEGTTLVKQVGAAASNKIIFGKKIIELHDRYMAFVNDCFQNQRL
FCKALEKAFETFCNVSSTIELLAIYCDDILKKNGNEKLNDDEIEETLEKVTKLLFYINDK
VLFAEYCRRKLAWRLLSDKGANEEHEKSFLSKLKRQNGAFFTSKMDRMVKDQTLSRQIQA
EFEEYLQTYPQANPGLDLTVTILTSASWPHYRSSHLKVPSEMVRCIQVFEGFYQPEKTRR
KLSWIYSLGTCTMNVIFDDKPVELFMTTYQAAVLLLFKDSERLNCTDIISQLNLTKDEVV
RLLRSLSCSSCKILNKEPNSNSISSEDVFEFNSKFIDRRKRINICLPPPADEKKIFEHVD
RDRIYAIDASLVRIMKFREVLHYRRLIAECVQQLSSIFKPNSSLIKRRIEDLMQRGYLER
DSKDPNFFKYLPE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgatgtggcggaggaagcagacccctttcgacgaagggtggaagtttgttgag
gaaggcatcaccaaactgaaaatgatcttgaaggaagggctctccctccccgagtcacct
atcacatccacggaattcattttactccacacatcaatctacaatatgtgtagccaatgg
aatgattataatcaggaggagctattatataataaatacacggaagtgttcgaggagtac
acgacttcagtggtattaccatctttagaggagaaatacaatgagttcatgctaagggaa
ctaactaaacaatggttaaatcataaatatatgaccaaatggctttcacatatttttggt
taccttagtcgtttcttcatcaagcagagatcccttccatcacttaatgaaattgcgctt
tcatgtttccgaaaccaggtttaccaggtaattaaaggaaaagttaaagatgctgtcatt
tctttgattgatcaagagcgtgagggtgaacaaattgatagggctttattgaagaatgtt
attgacatttttgttgaaattggatcggagaagatggattattatgaaaatgactttgaa
gtggaaatgcttaaagatacaaaaacctattactctaggaaggcttcaaatttgattcag
gttgaatcatgctcaaattacatgttaaaggttgaggaattctttaagagggagaaggat
agggttgctcattacttgcatgcttctagtgaactgaaactgttagagaaagtgcaagat
gaggtattagttgttcattcaagacaacttttggaaaaggaagattctatttgctatttc
ttacttcaagaggacagggtggatgatctctcacgaatgtataggctttttagcaagata
ccgaatggcctggatcttatctctaaaatatatcagaagcatgtgattgctgagggtaca
acgttagtcaagcaagtaggtgctgctgcaagcaacaagattatttttggcaagaaaatt
attgaactgcatgacaggtacatggcttttgtgaatgattgtttccaaaatcagcgtctt
ttctgtaaggcacttgagaaggcttttgagactttctgcaatgtgagctcaactattgag
ttactggctatctattgtgatgatattcttaagaagaatggaaatgaaaaactaaacgat
gatgaaattgaggagacacttgaaaaagttacgaaattacttttttatatcaatgacaaa
gttctgtttgcggagtattgtaggagaaagcttgcttggaggttgctatctgataaaggg
gctaacgaagaacacgaaaaaagttttttatcaaaactaaaaaggcaaaatggtgcattt
tttacttcaaagatggacagaatggtaaaagatcaaaccctcagtagacaaattcaagct
gaatttgaggaatatcttcaaacttatccacaggcaaatcccgggttagatctaacagtt
actattttgacaagtgcatcatggccacattatagatcatcccatctcaaagttccttct
gaaatggttagatgtatacaagttttcgaagggttctatcagccggaaaagactcgtagg
aaactttcatggatatattctttggggacgtgcaccatgaatgtcatcttcgacgataaa
cccgtagagctttttatgacaacatatcaagctgcagttttgctgctttttaaggactca
gagagattaaactgcactgatataatatctcagctcaacttaactaaggatgaggtagtc
agattgcttcgctccctttcttgctcgagttgtaaaattctgaataaagagccaaactcg
aactccatttcctcagaagacgtctttgagttcaattcaaagttcattgaccgaagaaaa
aggatcaatatctgtcttccacctccggcggatgagaagaaaatattcgaacacgtggac
agggatagaatatatgctattgatgcctcccttgttcgtattatgaaattccgagaagtg
ctgcattaccgacgtttaattgctgagtgtgtccaacagcttagttcaatattcaagccc
aactctagtctaataaaaaggcggatagaagatttgatgcaaagaggatatctagagaga
gactcaaaggatcctaattttttcaaatacttacctgaatga
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