Zingiber officinale (ginger): 121984152
Help
Entry
121984152 CDS
T08725
Name
(RefSeq) protein argonaute 1B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121984152
03036 Chromosome and associated proteins [BR:
zof03036
]
121984152
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121984152
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121984152
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121984152
microRNA pathway
RISC loading complex
121984152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
Gly-rich_Ago1
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
121984152
NCBI-ProteinID:
XP_042392893
LinkDB
All DBs
Position
5B:complement(14359586..14372719)
Genome browser
AA seq
1074 aa
AA seq
DB search
MVRKRRTDASGTGESSEYQETSGSAERTGPQRPSERGPAPQQQGTGRDRGWVASGPQQTQ
QGGRGGGGYYQGRGSSPQPHDPEQPFTPSQYQGRGGPQFRGGMPYQQQYGGRRGGRGMAG
GRMFSPSAAGSSRPPVPELHQATQAPYQPTQPGPVQATSSRQLEMSPTEIAEPFQQLSVQ
GESSSTQAIQPIVPPASSSKSVRFPVRPGKGTHGARCVVKANHFFAELPDKDLHQYDVSI
TPEVSSRSVNRAVMEQLVRIYRQSYLGGRLPAYDGRKSLYTAGPLPFTLRDFQIILDEDD
GSGTERRQRTFRVVIKLAARIDLHHLGMFLAGRQADAPQEALQVLDIVLRELPTARFLPV
GRSFYSPDLGRRQQLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVTEL
LNRDVQSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERG
TVKSVVQYFQETYGFTIQHTNWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQITA
LLKVTCQRPHDREMDILQTVRHNAYHEDPFAREFGIKISEKLASVEARVLPAPWLKYHDT
GREKNCLPRVGQWNMMNKKMVNGGRVNSWICINFARNVQDNVAKRFCQELAQMCQISGME
FSLDPVLPPLSARPDHVERALKVRYHDAMKILQPQEKELDLLIVVLPDNNGSLYGDLKRI
CETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALSRCIPLVTDRPTI
IFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLCKVWQDPQR
GTLTGGMIKELLISFKKATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNY
QPPVTFVVVQKRHHTRLFANNHNDNHSVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGI
QGTSRPAHYHVLWDENKFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFY
MEPETSDSGSLASGAAAGRGAPPGGPRATRGPGSAAVKPLPALKENVKRVMFYC
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaaacgcagaactgatgcttctggcacaggtgagagctcagaatatcaagag
acaagtggttctgcagagcggacagggcctcaacgaccctcagagcgggggcctgctcca
caacagcagggcactggtagagatagaggttgggttgcttctggtcctcagcagacacaa
caaggtggccgaggtggtggtggttattaccaggggcgaggcagcagcccccaacctcat
gacccagagcagccttttactccatctcagtaccaaggtcggggtgggcctcagtttaga
ggtggaatgccctatcagcaacaatatggaggacgacgtggtggtcgtggtatggctggg
ggacgaatgttcagcccctctgctgcaggttcctctaggccaccggttcccgagctgcac
caagcaacgcaagctccgtatcaacccactcaacctggaccagtccaggcaacttcttca
cggcagttggaaatgtctcctactgagattgcagaaccatttcagcaactctctgtgcaa
ggtgaatcttcatctactcaagcaatccagccaatagttccgcctgcttcttcaagcaag
tctgtgagattccctgttcgtcctgggaaaggtacccatggagctagatgtgtggttaag
gctaaccatttttttgctgaactccctgataaagaccttcaccagtatgatgtatcaatc
actcctgaagtatcatcacgcagtgtaaatcgtgctgtgatggaacagttggtcaggatt
tataggcaatcatatttgggaggacgtcttccagcttatgatggaaggaagagtctatat
actgctggtcctttaccatttaccttaagagattttcagatcattctggatgaggatgat
ggttctgggacagaaaggcgccagagaacattccgggttgtcattaaattagctgctcgc
attgatcttcatcaccttgggatgtttttagctgggaggcaggctgatgctcctcaagaa
gcattgcaagtactggatatcgtacttcgtgaactacctactgccagatttttgcctgtc
ggacggtccttttattcacctgatttgggaagaagacaacaacttggtgatggacttgaa
agttggagaggtttttaccagagcattcgccctactcaaatgggcctttctctgaatatc
gatatgtcctccacggccttcatcgaaccattgcccgttattgaatttgttaccgagctt
cttaatagggatgtccaatcaagaccgctttctgatgctgatcgtgtgaagatcaagaag
gccttgagaggtgtgaaggttgaggtcactcaccgtgggaatatgcgcagaaaataccgt
atatctggtttaacatcacaggcaactagagagctaactttcccagttgatgagaggggg
acagtgaagtctgttgtacaatattttcaggagacttatggttttactatccagcacaca
aattggccgtgcttgcaggttggaaatcagcagaggccaaattatttgcctatggaggtc
tgtaaaattgtggaaggtcaaagatattctaagaggttgaatgagaggcaaattactgca
ctcttaaaggtgacatgccaacggcctcatgacagggagatggatatcttacagacggtt
cgccacaatgcatatcatgaagatccttttgctagagaatttgggatcaagattagtgag
aaacttgcatcagttgaggcccgagtgctgcctgccccttggcttaagtatcatgatact
ggcagagagaagaattgcctaccaagagttggccagtggaacatgatgaacaagaaaatg
gtaaatggtgggagagtgaatagctggatatgtatcaattttgcaaggaatgtgcaagat
aatgttgctaagagattctgtcaggagcttgcccagatgtgccagatatcaggaatggaa
ttttctctggaccctgtacttcctcctttaagtgctcggcctgatcatgttgaaagagca
ctgaaagtgcgttatcatgatgcaatgaagatactccaacctcaggaaaaggagcttgat
ttgctgattgtagtattgcctgataataatggttctctttatggtgatttaaagcggata
tgtgagactgatcttggtttagtttcacaatgttgtttgacaaagcatgttttcaagatg
agtaaacagtaccttgccaatgttgctctcaagatcaatgtaaaggttggaggaaggaac
acagttcttgtggatgccttgtcaaggtgcattccccttgttactgaccggccaactata
atatttggtgctgacgtaacacatcctcatcctggggaagattctagcccttctattgct
gctgttgttgcatctcaagattggcctgaggtaacaaaatatgctggattggtctgtgct
caggcccatcgacaagaattaattcaagatctatgtaaggtctggcaagatcctcagcgt
ggaactcttactggtggcatgatcaaagagctgctgatttccttcaaaaaggctactgga
caaaagcctcaacggattatattttacagggatggagtgagtgagggccaattctatcaa
gttttactatatgaactggatgcaatcagaaaagcctgtgcctctctagaaccaaactat
caacctccggtgacttttgtggtggtccaaaaacgtcatcatactagactgtttgctaat
aatcacaatgataaccactctgtggataagagtggaaacatattgcctgggactgttgta
gattctaagatctgccatccaacagaatttgacttctacttgtgcagccatgctggcatt
caaggtactagccgacctgcccattaccatgtcttgtgggatgaaaataaattcacagca
gatgcgctgcaaactctgacaaacaacctctgttacacctatgcaaggtgcactcgttct
gtatctatagtgccgcctgcttattatgctcatctagcagcattccgtgctagattttac
atggaacctgagacatcagacagcggctctctggcaagtggagcagctgctgggcgtgga
gctccgcctggaggcccacgggcaacaaggggtcctggtagtgctgctgtcaaacctctt
ccagccttgaaggagaacgttaagagggtcatgttctattgttaa
DBGET
integrated database retrieval system
