KEGG   Zingiber officinale (ginger): 121984207
Entry
121984207         CDS       T08725                                 
Name
(RefSeq) WD repeat domain-containing protein 83-like isoform X1
  KO
K13124  mitogen-activated protein kinase organizer 1
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zof03041]
    121984207
Spliceosome [BR:zof03041]
 Complex C
  Other components
   Complex C specific factors
    121984207
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st EIF3I Beta-prop_WDR3_2nd WDR55 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_ACSF4 Beta-prop_DCAF4 WD40_RFWD3 WDR90_beta-prop_4th ANAPC4_WD40 NBCH_WD40 Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd WD40_like Beta-prop_IFT122_1st eIF2A Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_NOL10_N Beta-prop_WDR11_2nd WD40_CFAP43 Beta-prop_IFT140_1st VPS11_N VID27 Phi812_tail_tube
Other DBs
NCBI-GeneID: 121984207
NCBI-ProteinID: XP_042392965
LinkDB
Position
5B:complement(19552282..19555029)
AA seq 304 aa
MAKVGGGGAELPRREASVLKGHEGPVLAVRFNGDGNYCLSCGKDRTLRLWNPHKGIHIKT
YKSHGREIRDVHVTSDNAKLCSCGGDRQIFYWDVSTGRVIRKFRGHDSEVNAVRFNVYDS
VVVSAGYDQSVRAWDCRSHSTEPIQIIDTFQDSVMSVCLTKTEIIAGSVDGTVRTFDIRI
GREIVDSLGPAVNCISLSNDSNCVLANCLDSTIRLLDRTTGELLQEYKGHTCKSYKMDCC
LTNTDAHVTGGSEDGTIYFWDLVDASVVSSFKAHRSVVTSVNFHPKECCMLTSSVDGTVR
VWRQ
NT seq 915 nt   +upstreamnt  +downstreamnt
atggcgaaggtcggaggcggtggcgcggagctaccccggcgggaggcgagcgtgctgaag
ggtcacgaagggccggttctggcggttcgcttcaacggggatggaaactactgcctcagt
tgcggcaaggacagaaccctccgcctctggaacccccataagggcatccacatcaagacc
tacaagtcccatggccgcgagatccgcgacgtccatgtcacctcggacaacgcaaagctg
tgttcctgcggcggcgaccgccagatattctattgggatgtttccaccggccgcgtcatc
cggaagttccgaggccacgacagcgaggtgaatgctgtcaggtttaatgtatatgactca
gtcgtagtgtcggctggctatgaccaatcagttcgtgcatgggattgcagatcacatagt
acagagccgattcagatcattgatacatttcaagacagtgtaatgtctgtttgtttaaca
aagactgaaattattgctggaagtgtagatggaactgtccgcacatttgacatacgaatt
gggagggagattgtggacagtttggggccggctgtcaactgtatttctctgtcaaatgat
agtaactgtgtcttagcaaattgtttggattcgactatacgccttcttgataggaccacg
ggagaacttctgcaagagtacaagggacacacctgcaagtcttacaagatggattgctgc
ctaacaaacactgatgcacatgttacgggtggatctgaggacggcacaatatatttctgg
gatctagtggatgcttctgttgtttctagtttcaaagcacatcgctctgtggtgacgagt
gtgaattttcacccaaaggaatgctgtatgctaacatcatctgttgatggcacagtgcgc
gtatggagacagtga

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