KEGG   Zingiber officinale (ginger): 121984211
Entry
121984211         CDS       T08725                                 
Name
(RefSeq) signal recognition particle 54 kDa protein, chloroplastic-like
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03060  Protein export
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    121984211
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:zof02044]
    121984211
Enzymes [BR:zof01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     121984211
Secretion system [BR:zof02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   121984211
  Eukaryotic Sec-SRP protein
   121984211
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 ParA CLP1_P AAA_17 ArsA_ATPase AAA_16 nSTAND3 APS_kinase 6PF2K AAA_30 AAA_18 AAA_33 AAA_19 cobW NTPase_1 MeaB ATPase AAA_31 ATP_bind_1 AAA NPHP3_N TctA ResIII Thymidylate_kin AAA_24 CBP_BcsQ AAA_14 DUF4398 AAA_25
Other DBs
NCBI-GeneID: 121984211
NCBI-ProteinID: XP_042392970
LinkDB
Position
5B:19894703..19900105
AA seq 571 aa
MEAIYFSAPPSRHLSVGSPSLQFARAFCSSIRGAGTGRQSLHSNSSWTGSALYTGSSGRT
LFVREVWSWIHSKSERVRRGRCCIVRAEMFGQLTTGLETAWNKLRGVDVLSKENIAEPMR
DIRRALLEADVSLPVVRRFVQSVSDQAVGAGVIRGVRPDQQLVKIVHDDLVKLMGGEVSE
LVFAKSGPTVILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAIDQLKILGE
KIDVPVYAEGVDVKPAEIAKHGLEEAKKKSINVVIVDTAGRLQIDKSMMDELKEVKQALN
PTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLV
GRGERMEDLEPFYPDRMAGRVLGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFNDF
LKQTRAVAQMGSVSRVIGMIPGMGKVTPAQIREAEKNLNIMEAMINVMTPEEREQPELLA
ESAARRKRIATESGKTEQQVSQLVAQLFQMRVRMKNLLGVMQGGSIPALSNLEESLKAEQ
KAPPGTARRKRRQFADSASARPTPRGFGSKN
NT seq 1716 nt   +upstreamnt  +downstreamnt
atggaagccatctacttctcggccccgccttcccgccatctctccgtcggttcgccgtct
ctccagttcgcaagagccttttgcagctcaattagaggggctggaactggaaggcagagc
cttcattccaatagttcctggaccggctcggccctctacaccggatcttccggcagaacc
ctgttcgttagggaagtttggagctggattcattcgaaatctgagcgtgttcgtagaggg
agatgttgtatagtaagggcggagatgtttggtcaattgactactggtctagaaacagcg
tggaacaagctcagaggcgtagatgttttgtccaaggagaacattgcagaaccaatgagg
gatattaggcgagctctcctggaagcagatgtaagcttgcccgtggtgagaaggtttgtg
cagtctgttagtgatcaggctgttggtgcaggtgtgatacgaggtgtgagacctgaccaa
cagttagtaaagattgtgcatgatgaccttgtgaagttgatgggtggagaagtttcagaa
ttggtatttgcaaagtctggtccgacagtaattttactagctggtcttcaaggtgtcgga
aagacaactgtttgcgctaagcttgccttctacttaaagaaattgggtaagagttgcatg
ttggtggctgctgatgtgtataggcctgcagctatagaccaactcaagattttgggcgag
aagatagatgtccctgtttatgcagaaggtgtggatgtaaaaccagcagaaatagctaag
catggtcttgaggaggccaagaagaagtcaattaatgttgttatagttgatactgctgga
agattacagattgataaatcgatgatggatgagctgaaggaagtaaagcaggcactgaat
cctactgaagttctgctggtggttgatgcaatgactggccaagaagctgcagccttggtt
actacattcaatatcgagattggtattactggtgccatactaactaagctggatggtgat
tctagaggtggagcagctttgagtgttaaagaggtatcaggaaaacctataaagctagta
ggaagaggcgagcggatggaagatctagagccgttctaccctgaccgcatggcaggtcgc
gtattagggatgggtgatgttctttcatttgttgagaaagcacaagaagttatgcggcaa
gaagatgctgaggagttacagaaaaagatcatgagtgcaaaatttgacttcaatgacttt
ttaaagcaaacacgtgctgttgcacaaatgggttcagtgagccgggtaattggtatgatt
ccagggatgggcaaggtgactccagcacaaattcgtgaagcagagaaaaacttgaatatc
atggaagcgatgattaatgtgatgaccccagaggaacgagaacagcccgagctactagct
gagtcagctgctaggaggaagagaattgctacagagtctggaaagacagaacaacaggtt
agtcaacttgttgctcagttattccaaatgcgtgttcgcatgaagaatctattgggtgtg
atgcaaggaggatcgatcccggcattgagcaacctagaggagtctttgaaagccgagcaa
aaggcacctcctggaacagcacgaaggaaaagaagacagtttgcagattcagcgtcggca
aggcctactcctcgtggatttggaagcaagaactaa

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