Zingiber officinale (ginger): 121984215
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Entry
121984215 CDS
T08725
Name
(RefSeq) pre-mRNA-splicing factor 38-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121984215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
121984215
Spliceosome [BR:
zof03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
121984215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
121984215
NCBI-ProteinID:
XP_042392978
LinkDB
All DBs
Position
1B:146498137..146502114
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AA seq
387 aa
AA seq
DB search
MANRTDPAAKSIHGTNPQNLVEKILRSKIYQHTYWKEQCFGLTAETLVDKAMELDHLGGT
FGGSRKPTPFMCLILKMLQIQPDKEIVVEFIKNDEYKYVRILGAFYMRLTGTVTDVYRYL
EPLYNDYRKLRMKSPDGKFSLTHVDEVIDELLTKDYSCDVALPRVQKRWTLEACGLLEPR
RSALEDDFEEEEEKEEEDQAMEPVENGVHEKSYYRGRSPTRERDRDRKRDRQHRDRDYDR
DYGRGRERDRDRERDRDRDRDRDRERDRDRHRARDDKDYGRDRDREREREGRDRERRDRD
RGRRRSRSRSRSRDRRDRDLEEGDYRKRRARGSVSPRRRQVDDDNPREEPKKKKEKKEKK
SDGTDHPDPEIAEANRLRASLGLKPLK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgaacggatcccgcggcgaagagcatccacgggacgaacccccagaacctg
gtggagaagatccttcgctccaagatctaccagcacacctactggaaggagcagtgcttc
ggcctcaccgcggagaccctcgtcgacaaggccatggagctcgaccacctcggcggcacc
ttcggtggtagccggaaaccaacccccttcatgtgcctcatcctgaagatgcttcagatc
cagcccgacaaggagatcgtcgtcgagttcatcaagaacgacgaatacaagtacgttcga
attctcggggctttctacatgcggctcacaggcaccgtcacggatgtgtatcgctatttg
gaacccctctataacgattatagaaaacttagaatgaagtcgcccgacggaaagttttcc
ttgactcacgtggacgaagtcattgatgagctccttacaaaggattactcctgcgacgtt
gccctccctcgtgttcagaaaagatggacccttgaagcatgcggcttgcttgaacctaga
agaagtgcgcttgaagatgattttgaagaggaagaagaaaaagaggaagaggatcaggct
atggagcctgtagagaatggtgtccatgaaaagagttattatcgtgggcgtagtcctaca
cgggagagggacagagatagaaagcgtgacagacaacatagggacagggattatgatcga
gattatggtagaggacgtgaaagagatcgtgatcgtgaaagagaccgtgacagagacaga
gatagagatagagaaagggaccgagaccgtcaccgagcaagagatgacaaggactatggt
cgtgacagagaccgtgaacgggaaagggaaggtcgcgaccgagaaagaagagatagggac
cgtggaaggcgtaggagccgctcgaggagccgaagcagagaccgacgagatagggatctt
gaagaaggtgactatcggaagaggcgtgcccgaggcagtgtcagccctcgcagacggcaa
gtggatgatgacaaccctagggaagagcccaagaagaaaaaggaaaagaaagagaagaaa
agtgatggaactgatcacccagatccagaaattgctgaagctaatagattacgagcttct
cttgggttgaagccactgaagtaa
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integrated database retrieval system