KEGG   Zingiber officinale (ginger): 121984215
Entry
121984215         CDS       T08725                                 
Name
(RefSeq) pre-mRNA-splicing factor 38-like
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121984215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zof03041]
    121984215
Spliceosome [BR:zof03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    121984215
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 121984215
NCBI-ProteinID: XP_042392978
LinkDB
Position
1B:146498137..146502114
AA seq 387 aa
MANRTDPAAKSIHGTNPQNLVEKILRSKIYQHTYWKEQCFGLTAETLVDKAMELDHLGGT
FGGSRKPTPFMCLILKMLQIQPDKEIVVEFIKNDEYKYVRILGAFYMRLTGTVTDVYRYL
EPLYNDYRKLRMKSPDGKFSLTHVDEVIDELLTKDYSCDVALPRVQKRWTLEACGLLEPR
RSALEDDFEEEEEKEEEDQAMEPVENGVHEKSYYRGRSPTRERDRDRKRDRQHRDRDYDR
DYGRGRERDRDRERDRDRDRDRDRERDRDRHRARDDKDYGRDRDREREREGRDRERRDRD
RGRRRSRSRSRSRDRRDRDLEEGDYRKRRARGSVSPRRRQVDDDNPREEPKKKKEKKEKK
SDGTDHPDPEIAEANRLRASLGLKPLK
NT seq 1164 nt   +upstreamnt  +downstreamnt
atggcgaaccgaacggatcccgcggcgaagagcatccacgggacgaacccccagaacctg
gtggagaagatccttcgctccaagatctaccagcacacctactggaaggagcagtgcttc
ggcctcaccgcggagaccctcgtcgacaaggccatggagctcgaccacctcggcggcacc
ttcggtggtagccggaaaccaacccccttcatgtgcctcatcctgaagatgcttcagatc
cagcccgacaaggagatcgtcgtcgagttcatcaagaacgacgaatacaagtacgttcga
attctcggggctttctacatgcggctcacaggcaccgtcacggatgtgtatcgctatttg
gaacccctctataacgattatagaaaacttagaatgaagtcgcccgacggaaagttttcc
ttgactcacgtggacgaagtcattgatgagctccttacaaaggattactcctgcgacgtt
gccctccctcgtgttcagaaaagatggacccttgaagcatgcggcttgcttgaacctaga
agaagtgcgcttgaagatgattttgaagaggaagaagaaaaagaggaagaggatcaggct
atggagcctgtagagaatggtgtccatgaaaagagttattatcgtgggcgtagtcctaca
cgggagagggacagagatagaaagcgtgacagacaacatagggacagggattatgatcga
gattatggtagaggacgtgaaagagatcgtgatcgtgaaagagaccgtgacagagacaga
gatagagatagagaaagggaccgagaccgtcaccgagcaagagatgacaaggactatggt
cgtgacagagaccgtgaacgggaaagggaaggtcgcgaccgagaaagaagagatagggac
cgtggaaggcgtaggagccgctcgaggagccgaagcagagaccgacgagatagggatctt
gaagaaggtgactatcggaagaggcgtgcccgaggcagtgtcagccctcgcagacggcaa
gtggatgatgacaaccctagggaagagcccaagaagaaaaaggaaaagaaagagaagaaa
agtgatggaactgatcacccagatccagaaattgctgaagctaatagattacgagcttct
cttgggttgaagccactgaagtaa

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