Zingiber officinale (ginger): 121984259
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Entry
121984259 CDS
T08725
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121984259
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121984259
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
Soyouz_module
Motif
Other DBs
NCBI-GeneID:
121984259
NCBI-ProteinID:
XP_042393039
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All DBs
Position
5B:25464250..25477613
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AA seq
696 aa
AA seq
DB search
MSFPFLPSKRAYERNPIEPNGRAKWQKTGPHTKQQKQIKAPTGVTMFRVLCPASKSDSVI
GKGGEIVARIQRETGAKIRLEEIVSGCDERVILITGSEKDAELGNEHKKEDEDTLVSEGD
VNLKESAENIGEAEDSSAPESTKVDGGPPLLVNALLLIFEGIIENEPVNEVDEEESKKLS
TVSARLLILSNQVGCLLGKGGSVIKQISADSGAHIRILSKDKLPLCGTQQDEIVQVTGGV
DSVKKALHLVGQQLLDNPPRERDPFPPANSFGPSSHPFTSIPRPEGLPLPKFHYPPQGPP
FSNRSQGMPDFHQGMGSPFPKFHESGPPIHPQISAEPITFRLLCPAEKVGIVIGKGGNTV
KTLQNETGCEVKVTETTPESDNRIIIISGVAFPSDEVAPVQDAVLRVQHRIVMGVPDPKE
GTVMCRLIVASNQIGCLLGKGGAVITEIRKLSGAQVRILGKDQIPTGVPENYGMVQISGE
FGAVQDALLQITFRLKQHLFRDKLPSMDPNMHPSFVEQIPPYGLHRGRRESSPSMLNSNL
PPFQKDFVGHPFEERAAFSHRMHGSGIPPLGVERPGPWLPQGMRDSGGPLPLPDYPGVGP
HRRMGLFASGNQSVPIGSVDVVVPRSLVPNLYGVDGGCLRWIREISEAKITITEPRAEAT
ETMIIIAGTPEQTHAAQSLIQAFVLSETSSIESAKP
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttccatttttaccttccaagcgtgcttatgaaagaaatcccattgagccaaat
gggagagcaaaatggcaaaagacaggacctcatacaaaacagcagaaacagataaaagca
cccactggggttaccatgttccgagttctgtgtcctgcatcaaaatctgacagtgtgatt
ggtaaaggtggagaaattgtagcaaggatacagagagaaactggtgcgaagattagactt
gaagaaattgtatctggttgtgatgagagagttattcttattactggatcagagaaagat
gcagaacttggcaatgaacataaaaaagaagatgaagacactcttgtttctgaaggcgac
gtcaatctcaaggaaagtgctgaaaacattggagaggccgaggactcttctgctccagaa
agtacaaaagtggatggaggaccaccgttgttagttaatgctcttttgcttatatttgag
ggaattattgaaaatgaaccagttaatgaggtagatgaagaagaaagtaagaagctttct
acagtttctgcgagattgttaattctgtctaatcaagttggttgtctacttgggaagggt
gggagtgttatcaaacagatatcagcagacagtggagcccatattcgcatactttcaaaa
gataaacttcctttgtgtggcacacaacaggatgaaattgtccaggtaactggaggggtt
gattcagtgaagaaagctcttcatttagttggtcagcagctcctagataacccaccacgc
gaacgtgatccatttcctccggcaaattcttttggtccctcatcacatccatttacttct
attcctcggccagaaggtcttccactacctaagtttcattatcctcctcaaggaccaccc
ttctctaacaggtctcagggcatgcctgacttccatcaaggcatgggttcaccttttcct
aaatttcatgaaagtggaccacccatccatcctcaaatatctgcagagcccatcactttc
aggttactctgccctgctgagaaggttggaattgtgatagggaagggagggaacactgtt
aaaactcttcaaaatgaaactggttgtgaagttaaagttacagagacaactcctgagtca
gataatcgcattataatcatatctggtgttgcatttccatcggatgaggttgcgccagta
caggatgctgttcttcgtgtgcagcacagaatagtaatgggtgtacctgatcctaaagag
ggcactgtcatgtgtaggctgattgttgcttccaatcaaattggttgtcttcttggcaaa
ggtggagctgtaataactgagataaggaagctttctggagctcaagtacgtatccttggt
aaagatcagatccctacgggtgtacctgaaaattatgggatggtccagatatctggagaa
tttggagcagttcaggatgcattgttacaaataacttttaggctgaagcaacatcttttc
cgtgataagttaccttccatggatcccaacatgcatccttcttttgttgagcaaatacct
ccatatggattgcacagaggaaggagggagtcgtcaccctccatgttgaactctaatttg
cccccatttcagaaagattttgttggtcacccctttgaggaaagagctgccttttctcat
cgaatgcatggttcaggtattcctcctcttggcgttgagagacctggaccatggctacct
cagggcatgagagattctggtggccccttgcctttacctgattaccctggagtaggtcca
catagaaggatgggtttatttgctagtggaaaccaatcagttcctattggaagtgtagat
gtcgttgttccacggtctcttgtacctaacttgtatggtgtagatggtggctgcctaagg
tggatccgtgagatatcagaagcaaaaattacgattactgaacctagagcagaggcaact
gagacaatgatcataatagctggaacaccggaacagacccatgctgctcaaagtctcatc
caagcttttgtgctgagtgaaactagttccatagaatcggccaaaccttga
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