Zingiber officinale (ginger): 121984276
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Entry
121984276 CDS
T08725
Name
(RefSeq) nijmegen breakage syndrome 1 protein-like isoform X1
KO
K10867
nibrin
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121984276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zof03032
]
121984276
03400 DNA repair and recombination proteins [BR:
zof03400
]
121984276
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
121984276
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
121984276
BRCA1-C complex
121984276
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
PTCB-BRCT
Yop-YscD_cpl
Nbs1_C
Motif
Other DBs
NCBI-GeneID:
121984276
NCBI-ProteinID:
XP_042393067
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Position
5B:27613787..27625071
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AA seq
564 aa
AA seq
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MVWGLFPVDTARGVQKYYIFSRRTYKVGRKDCDVVVQTDTSISREHAEIVVDKMTSQDPS
ISKSMTSPTCVRIIDRSKFGTIINKEMASKATQLKKNQEIMLTDGDSVTFGTGNATFRFS
YVPLLIFLHCMKSTPLDSVLQATISNIGAYATNSWSSECTHVVVEKSSQVTPELIQAVLA
RNPIVLSDWLKVFAERSICTEIPSCTMYVPDLCLDGTSVKIVEPKQRDKVLEGYSFVLGS
YKYKFGDMLQSLLKLVGARCLSADEFSSNSQTSADGENNQFILVVPITSADEFNPSRELS
SLARVVDVKLVAVILSGQLDASIFEQSPYVVLSSHSTDETVVAASDTEMDTAASEHVYAS
SKPQVAISQKSEDLPEHRSESQKVPTSFRNRDNINEDYENLIAQRSEDGKVAKTHDNKES
DSISTIPSKNVSDSSSKDGVIEKLVKNDESVDRHENSDIIYSQDLIVQNSSMKIPLRSTA
RGCVNFKCFRKKEIVSGNSFKDLIPFSKDPYREYDCTGNLTSEYITEEKKRKQLEAIAED
LFNNDKGRKRAAAGTSIYSLFTQK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggtctctttcccgtcgatactgcgcgaggtgttcagaagtactacatcttc
tcccgaaggacgtacaaagttggtcgaaaggactgtgatgtggttgttcaaacggacaca
tcaatttcgcgagagcatgctgagattgttgttgataaaatgacatctcaagatccctct
ataagtaagagcatgacttctcccacatgtgttcgaattattgatcgatcaaagtttggt
acaatcatcaacaaagaaatggcatcaaaagcaactcagttgaagaaaaatcaggagata
atgctcacagatggagattctgttacttttggaacaggcaatgcaaccttcaggttctct
tatgttcctctgctgatttttttacattgtatgaaatccactccattggattcagtgctt
caggcgacaatatcaaatattggggcgtatgctaccaatagctggagttctgagtgcaca
catgtcgttgttgaaaaatcttctcaggtgacacctgagcttattcaagctgttttggca
aggaatcctattgttctcagtgactggcttaaggtgtttgctgagaggagtatatgcaca
gaaattcctagttgtactatgtatgtcccagatttgtgtttagatgggacatcggtaaaa
attgtggagcccaaacaacgggataaagtacttgaaggctattcttttgtccttggatca
tataagtataaatttggggatatgttacaatctttattaaaactagttggagctagatgc
ctcagtgctgatgaattttcttcaaatagtcagacttctgcagatggggagaataaccag
tttattcttgttgttcctattacctctgctgatgaattcaatccctcgcgtgagctgtct
tctttggccagggttgtcgatgtaaagctagttgctgttattctatctggacagctggac
gcctccatctttgagcaatcgccctacgtcgttttatcttcgcattcgactgacgaaact
gtggtagctgcttcagatactgaaatggatactgctgcatccgaacatgtttatgcctca
tcgaaacctcaagttgccatcagtcagaaaagcgaagatttgccggagcatagatctgag
tctcaaaaggtccctacaagtttcagaaacagagataacatcaatgaggactatgaaaat
ttaattgcacaaagatctgaggatggaaaagttgctaaaactcatgataacaaagaaagt
gatagtatctccaccattccctccaaaaatgtttcagattcaagctctaaagatggtgtc
atagaaaaattggtgaaaaatgatgaatctgttgacagacatgaaaattcagatatcata
tacagccaggatctgatcgtacaaaacagtagcatgaaaattcctctaagatccactgcc
agaggatgtgtaaacttcaaatgtttcagaaagaaagagattgtatctggcaacagcttc
aaggatctcattcccttttcaaaagatccatacagagagtatgattgcacaggtaacctg
acatcagaatacatcacggaagagaagaaacgcaagcaactcgaagcaattgctgaggat
ttgttcaacaatgacaaggggaggaagcgtgctgcggctggaacttctatttattctctt
tttactcagaaatga
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