KEGG   Zingiber officinale (ginger): 121984276
Entry
121984276         CDS       T08725                                 
Name
(RefSeq) nijmegen breakage syndrome 1 protein-like isoform X1
  KO
K10867  nibrin
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    121984276
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:zof03032]
    121984276
   03400 DNA repair and recombination proteins [BR:zof03400]
    121984276
DNA replication proteins [BR:zof03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    121984276
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     121984276
    BRCA1-C complex
     121984276
SSDB
Motif
Pfam: FHA BRCT PTCB-BRCT Yop-YscD_cpl Nbs1_C
Other DBs
NCBI-GeneID: 121984276
NCBI-ProteinID: XP_042393067
LinkDB
Position
5B:27613787..27625071
AA seq 564 aa
MVWGLFPVDTARGVQKYYIFSRRTYKVGRKDCDVVVQTDTSISREHAEIVVDKMTSQDPS
ISKSMTSPTCVRIIDRSKFGTIINKEMASKATQLKKNQEIMLTDGDSVTFGTGNATFRFS
YVPLLIFLHCMKSTPLDSVLQATISNIGAYATNSWSSECTHVVVEKSSQVTPELIQAVLA
RNPIVLSDWLKVFAERSICTEIPSCTMYVPDLCLDGTSVKIVEPKQRDKVLEGYSFVLGS
YKYKFGDMLQSLLKLVGARCLSADEFSSNSQTSADGENNQFILVVPITSADEFNPSRELS
SLARVVDVKLVAVILSGQLDASIFEQSPYVVLSSHSTDETVVAASDTEMDTAASEHVYAS
SKPQVAISQKSEDLPEHRSESQKVPTSFRNRDNINEDYENLIAQRSEDGKVAKTHDNKES
DSISTIPSKNVSDSSSKDGVIEKLVKNDESVDRHENSDIIYSQDLIVQNSSMKIPLRSTA
RGCVNFKCFRKKEIVSGNSFKDLIPFSKDPYREYDCTGNLTSEYITEEKKRKQLEAIAED
LFNNDKGRKRAAAGTSIYSLFTQK
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggtttggggtctctttcccgtcgatactgcgcgaggtgttcagaagtactacatcttc
tcccgaaggacgtacaaagttggtcgaaaggactgtgatgtggttgttcaaacggacaca
tcaatttcgcgagagcatgctgagattgttgttgataaaatgacatctcaagatccctct
ataagtaagagcatgacttctcccacatgtgttcgaattattgatcgatcaaagtttggt
acaatcatcaacaaagaaatggcatcaaaagcaactcagttgaagaaaaatcaggagata
atgctcacagatggagattctgttacttttggaacaggcaatgcaaccttcaggttctct
tatgttcctctgctgatttttttacattgtatgaaatccactccattggattcagtgctt
caggcgacaatatcaaatattggggcgtatgctaccaatagctggagttctgagtgcaca
catgtcgttgttgaaaaatcttctcaggtgacacctgagcttattcaagctgttttggca
aggaatcctattgttctcagtgactggcttaaggtgtttgctgagaggagtatatgcaca
gaaattcctagttgtactatgtatgtcccagatttgtgtttagatgggacatcggtaaaa
attgtggagcccaaacaacgggataaagtacttgaaggctattcttttgtccttggatca
tataagtataaatttggggatatgttacaatctttattaaaactagttggagctagatgc
ctcagtgctgatgaattttcttcaaatagtcagacttctgcagatggggagaataaccag
tttattcttgttgttcctattacctctgctgatgaattcaatccctcgcgtgagctgtct
tctttggccagggttgtcgatgtaaagctagttgctgttattctatctggacagctggac
gcctccatctttgagcaatcgccctacgtcgttttatcttcgcattcgactgacgaaact
gtggtagctgcttcagatactgaaatggatactgctgcatccgaacatgtttatgcctca
tcgaaacctcaagttgccatcagtcagaaaagcgaagatttgccggagcatagatctgag
tctcaaaaggtccctacaagtttcagaaacagagataacatcaatgaggactatgaaaat
ttaattgcacaaagatctgaggatggaaaagttgctaaaactcatgataacaaagaaagt
gatagtatctccaccattccctccaaaaatgtttcagattcaagctctaaagatggtgtc
atagaaaaattggtgaaaaatgatgaatctgttgacagacatgaaaattcagatatcata
tacagccaggatctgatcgtacaaaacagtagcatgaaaattcctctaagatccactgcc
agaggatgtgtaaacttcaaatgtttcagaaagaaagagattgtatctggcaacagcttc
aaggatctcattcccttttcaaaagatccatacagagagtatgattgcacaggtaacctg
acatcagaatacatcacggaagagaagaaacgcaagcaactcgaagcaattgctgaggat
ttgttcaacaatgacaaggggaggaagcgtgctgcggctggaacttctatttattctctt
tttactcagaaatga

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