Zingiber officinale (ginger): 121984296
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Entry
121984296 CDS
T08725
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121984296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
121984296
Spliceosome [BR:
zof03041
]
Common components
Common spliceosomal components
SR proteins
121984296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
RRM_occluded
zf-CCHC_3
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
121984296
NCBI-ProteinID:
XP_042393098
LinkDB
All DBs
Position
5B:complement(28733022..28737612)
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AA seq
335 aa
AA seq
DB search
MPRHDDRYANTRLYVGRISHRTRARDLEDLFGRYGRVRNVDMKHDFAFVEFSDPRDADDA
RYSLDGREFDGSRIIVEFARGVPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG
DWKNKCYRCGERGHIERNCQNSPKKLKRGRSYSRSPSPRRGRSRSRSYSRSRSYSRSRSP
VRDGRRADREDRGGSRSPHYSRSPRGSPPPSKDRRRSPSPDGSRSPKDRTRNSPPKEEAE
RNGSDYGRSPHRENSRSPMSQERESPRAMSQERESPRARSHERVSPLARSHESESPRGRS
YKSPETNGGSRSPREYDDDDNNQYASPRRSASPPS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtcatgatgatcgctatgcaaacacccggttgtatgttggtcgaatttctcat
cgcacccgtgctcgtgatcttgaagacctctttggtcgatatggaagagtacgaaatgtg
gatatgaagcatgatttcgcctttgttgaattcagtgaccctcgagatgctgatgatgca
aggtacagtctagatggacgagagtttgatggtagccgaattatagtggagtttgctaga
ggggttcctcgaggtcctggaggttctcgtgaatatctaggaaggggacctcctcctggt
tctggccgatgctttaactgtggtatagatgggcattgggctcgggactgcaaagcagga
gactggaaaaacaagtgttatcgttgtggagagaggggccacattgaaagaaactgccaa
aatagtcctaaaaagctcaaacgcggacggagttattcaagatcaccttctccacgccgt
ggtaggagcaggagtcggagttacagccgaagccggagttacagccgttcaagatctcct
gtgagagatgggcgtcgtgctgaccgtgaagataggggtggatcgagaagcccccactac
agcaggagccccaggggtagccctccaccttcaaaggataggaggcgcagcccctcccct
gatggcagcaggagtcctaaggaccgaactaggaactctcccccgaaggaggaagctgag
cgcaatggttctgactatggtcgtagtccccatagggaaaacagcaggagccctatgagc
caagaaagggagagccctcgtgccatgagccaggaaagggagagtcctcgtgccaggagc
catgaaagggtgagtccgcttgccaggagccacgaaagtgagagccctcgcggcaggagt
tacaaaagccctgaaactaatggtggaagtcgaagccctagggagtatgatgatgatgat
aataatcaatatgcatctccaaggcgcagtgcctctcctccaagctga
DBGET
integrated database retrieval system
