Zingiber officinale (ginger): 121984351
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Entry
121984351 CDS
T08725
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121984351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121984351
03016 Transfer RNA biogenesis [BR:
zof03016
]
121984351
03012 Translation factors [BR:
zof03012
]
121984351
04131 Membrane trafficking [BR:
zof04131
]
121984351
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121984351
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121984351
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121984351
Translation factors [BR:
zof03012
]
Eukaryotic type
Elongation factors
121984351
Membrane trafficking [BR:
zof04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
121984351
Exosome [BR:
zof04147
]
Exosomal proteins
Proteins found in most exosomes
121984351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
AAA_22
SRPRB
Motif
Other DBs
NCBI-GeneID:
121984351
NCBI-ProteinID:
XP_042393175
LinkDB
All DBs
Position
5B:36277187..36284795
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKVHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK
VGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRPTDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
SEILTKIDRRSGKELEKEPKFLKNGDAGFVKMTPTKPMVVETFAEYPPLGRFAVRDMRQT
VAVGVIKNVEKKEPTGAKVTKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagagaaggttcatatcagcattgtggtcatcggtcatgtcgactctggcaag
tcaactaccactggacatcttatttacaagcttggtggcattgataagcgtgtgattgag
aggttcgaaaaggaggctgctgagatgaacaagaggtcattcaagtatgcctgggtcctt
gataagctcaaggctgagcgcgaaagagggattactattgatattgctctttggaagttt
gagacaaccaagtattactgcacagtcattgatgctcctggacaccgtgatttcatcaag
aatatgatcactggaacctcccaggcagattgtgctgttcttatcattgactcaacaact
ggtggttttgaagctggtatttcaaaggatggtcagactcgtgagcatgccttacttgct
tttacacttggagttaaacagatgatttgctgttgcaacaagatggatgcaaccaccccc
aagtattccaagtcaaggtacgatgaaattgtgaaggaggtttcttcctacctcaaaaag
gttggctacaaccccgagaagatcccttttgttcccatctctggatttgagggtgacaac
atgatcgagaggtctaccaacttggactggtacaagggccccaccctccttgaggctctc
gacttgatcaatgaaccgaagaggcccacagataaaccccttcggctccctcttcaggat
gtgtataaaattggtgggattggtactgttccagttggacgagttgagacaggtgtcctc
aagcctggtatggtcgttacatttggtccaactgggttgacgactgaagtcaagtcggtt
gagatgcaccatgaagctctccaggaagctctccctggtgataatgttgggtttaatgtg
aagaatgtcgcagttaaggatcttaagagaggttttgttgcatccaactcgaaggatgat
cctgcaaaggaggctgctaacttcacttctcaggtgatcatcatgaaccacccaggccag
attggcaatggctatgcccccgtcttggactgccacacctctcacatcgcagtcaagttt
tctgaaattctcaccaagattgatagacgatctggcaaggagcttgagaaagagcccaaa
ttccttaagaatggtgatgctggctttgttaagatgaccccaaccaagcccatggtggtc
gaaactttcgctgagtaccctccacttggtagatttgctgtgagggacatgcggcagacg
gttgctgtcggagtcatcaagaatgttgagaagaaggagccaaccggtgccaaggttacc
aaggctgcagccaagaagaagtga
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