Zingiber officinale (ginger): 121984671
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Entry
121984671 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 1 isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121984671
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121984671
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
121984671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
RING_XB3-XBAT31
zf-rbx1
Prok-RING_4
zf-RING_5
zf-RING_6
zf-C3HC4_5
TPR_MLP1_2
zf-ANAPC11
Spectrin_5
zf-C3HC4_4
DUF7129
Ig_TMEM131homol_3rd
Zn_ribbon_19
zf-Nse
RING-HC_RBR_RNF216
Motif
Other DBs
NCBI-GeneID:
121984671
NCBI-ProteinID:
XP_042393672
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All DBs
Position
5B:80633541..80642214
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AA seq
879 aa
AA seq
DB search
MGSTGEPVRKRRYFSPISPTSAGTTKKQPFSPRSEDKKLDVAVLRYKNQKLSEQLEAQKF
EYLTLENKFHQIKEKQKTHEDMLLLVNNNWETLLSDLDSLSASTSGSTSAIHLKCSHLSN
GGSSFSIEEDFLRRLLETGATECSEDASPTSNQDDTQTEASMTKSILKNLISLLNDVWHV
NEAFSSACLATLPEDEPSRKLLKVIQNLEVEVRNFLVAVGDLHLKHRSVTDDLLNHQDID
LKNKAECKRLAEELASTVAELEENNCRISKLKLHKGTTQSSYFLFPNFGNKQVAGDKVKD
AEKDMQHMESSLKELMGLVSSRLEDIKRLHEDRIEILKKLADTRNALMDFKKISSSKAFV
CLSDRLNTSKEEMDQCRVSLEKLQVEKDSFIWWEKEVNLKHEIADVGRTISFLSESRIAE
LQQILQKLADERVMLETKLEAATRESSREEIIQDFKALAASLPKSMEIMQSEIDQKKEAT
VDLHSLRAEVQSLSSLLHRKENEIKTLFGTSSHQLSEIKQLHTTVQDLRDNNHELKLFIE
MYRRESTDSRDLIVSKDNEYKAWAHVHTLKSSLDEHNLELRVKAAIEAEATSQKRLTSAE
AEIDELRQKLETCERDLSKLSEILTSKHEEGRTYLSEIECIGQSYVDMQTQNQHLLQQII
ERDDYNIKLVMEGTKEKQVQEALRLEIQITNRKLQEAKLLMDSYDLRVSKMDEQLKIWSE
QVGKLAEDARQSRAAFEHTMKRLLEIQMEAQKSRQLLDLVQNKVEGSRLEVANLLIEIEK
ERFNKKRIVESLDDMTRKAAYLRVQTKGSVLEKLQQEVKEYRGILKCSICLDRQKEVVIA
KCYHLFCYQCIQRTISNRQRKCPTCGSSFGANDVKPIYI
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcactggggagccagtgagaaagcgacggtatttcagtcccatttctcccact
agcgctggtaccaccaagaagcagcctttttcacctcgttctgaggacaagaagcttgat
gttgctgtgttgagatacaagaatcagaagctctctgaacaattagaagctcagaaattt
gagtatcttactcttgagaataaatttcatcagatcaaagagaaacaaaagacacatgaa
gacatgttacttttggtcaataataactgggagacgcttctcagtgacctggactcactt
tctgcctcaacaagtggatctacaagtgctattcacttgaaatgctctcatttgtctaac
ggtggatcatccttctccatagaagaggatttcttgaggagactcctggaaacaggtgca
accgaatgttcagaggatgcatctcctacatctaaccaagatgatacacaaacagaagct
tcgatgaccaaaagcatcttgaagaatcttataagcttgctcaatgatgtgtggcatgtg
aatgaggcattttctagtgcttgccttgcaactctacctgaagatgaacccagcaggaaa
ttgctgaaggttattcaaaaccttgaggtagaggtcaggaactttctagtggctgttggt
gatcttcatttaaaacatagatcggtgacagatgatctcctaaaccaccaagatattgat
ttgaaaaataaggctgaatgcaaacgactagcagaggagttggccagtacagttgcggag
ttggaagaaaacaattgtagaatatcaaagctgaagttgcataaaggcacaacccaaagt
tcctatttccttttccctaattttggaaacaaacaagttgctggagataaagtgaaggat
gctgaaaaggatatgcaacacatggaatcttccctcaaagaattgatgggtctggtttct
agccggttagaggacataaagagactgcatgaagacagaattgagattctaaagaaacta
gctgatacgcggaatgctttgatggatttcaagaagatatcttcatctaaggcttttgtg
tgtctgagcgatcgcctgaatacatcaaaggaagaaatggatcagtgccgggtttcactt
gagaaattgcaggttgaaaaagacagcttcatttggtgggaaaaggaggtgaatttgaaa
cacgagattgctgatgttggtaggacaatctctttcctttctgaatccagaattgctgag
ctacagcagattctgcagaaattggctgatgaaagggttatgttagagaccaaacttgaa
gcagccacgagagaatcaagtagggaggagataattcaagacttcaaggcacttgctgct
tcactgcctaaaagcatggagatcatgcaaagtgaaattgatcaaaaaaaggaagctact
gtagatcttcattctctgagagcagaagtgcaatctctttctagtttgctgcataggaag
gagaacgagattaaaactttattcggtacatcttctcatcaactttctgaaataaagcag
ctgcatacaactgttcaagatttgagagataataatcacgagttgaaacttttcatagag
atgtatagacgtgaatccaccgattccagagatctcatagtatccaaagacaatgaatac
aaggcatgggctcacgtccataccctcaaatcatctcttgatgaacacaacttagagttg
cgtgttaaggcggccattgaagctgaagcaacatctcaaaagaggctaacctctgccgaa
gctgagatcgatgaattgaggcagaagttggagacatgcgagagagatttgtctaaattg
tcagagattctgacatcaaaacacgaggaaggaagaacatatttatctgaaattgagtgt
atcgggcaatcatatgtcgacatgcaaactcaaaatcaacatctgttgcagcaaattata
gagagagatgactacaacatcaaacttgtgatggagggcacgaaagagaagcaagtgcag
gaagctcttcgcttggaaatacaaattacgaacaggaagctacaagaggcaaaactgttg
atggattcatacgacctgagagtttctaaaatggatgaacagttgaagatatggtcagag
caagttggaaaactcgccgaggatgctcgacaaagtagagctgcttttgagcacacaatg
aaaaggctattggagatacagatggaggcccaaaaatcaagacaattactcgatctcgtc
caaaacaaggtcgagggaagccgactggaggtagcaaatttgctgatagaaatagagaaa
gagaggttcaacaagaagaggatcgtggaaagtttagacgacatgacaaggaaagctgcc
tatctcagggtacaaaccaagggttctgtcctggagaaacttcagcaagaagtaaaagaa
tatcgtggaatcctcaagtgcagtatctgcctcgatcggcaaaaggaggtcgtgatagcg
aaatgctaccatttgttctgctatcagtgcattcaaagaacaattagcaaccgtcagcgc
aagtgtccaacttgcggttcgagttttggcgccaacgatgtcaagccgatctacatataa
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