Zingiber officinale (ginger): 121984686
Help
Entry
121984686 CDS
T08725
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03250
Viral life cycle - HIV-1
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121984686
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121984686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121984686
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121984686
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
121984686
Exosome [BR:
zof04147
]
Exosomal proteins
Proteins found in most exosomes
121984686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
DUF2087
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
121984686
NCBI-ProteinID:
XP_042393700
LinkDB
All DBs
Position
1B:complement(148600523..148602312)
Genome browser
AA seq
400 aa
AA seq
DB search
MAPQPPTSELNIQQVQQFLTNSLSQRGPSALPYAEDVKWHIRQHLVALMGAFPSLRPRAS
SFTHNDGRSAHLLQGEGTMPISFRGAVYHLPVVIWLLESYPRRPPAVYLTPTRDMLVKPG
HSLVDPSGLVREDAVPYLRSWVYPASNLVDLVRSLSHLFGIDPPLYTRPSHTPSPPAPSP
SPSFSSPYGSGGGEPTRFPPPPSTQAHFSARPTEDPSEVYRRNAISKILESVHADMATLR
HSQEAEMEGLFSTQAELRRRQQELSRGLQEMIQEKEGFEQQLQLVLMNSDLLEGWVRENE
ELCRRCREGVDVDDVFEPVDGLSRQMTECTAADIAIEDTIYALDKAVQEGAIPFDSYLRT
VRTLSREQFFHRATAAKGRATLVHAQVTSMASRTQQYVSQ
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcaaccgccgacatcggagctcaacatccagcaagttcagcagttcctcacg
aattcgctgtcgcaacggggaccgtcggcgttgccctacgccgaggacgtgaagtggcac
atccgccagcatttggtcgccctgatgggggccttcccttccctccgcccacgcgcctcc
tcgttcacgcacaacgacggccgctccgcacacctcctccagggcgagggcaccatgccg
atctccttccgtggtgccgtgtaccaccttcccgtcgtcatttggctcctcgagtcctac
ccgcgccgacctcctgccgtctacctcacccctacgcgcgacatgctcgtcaagcctggg
cactctctcgttgacccttccggccttgtccgtgaggacgcggtcccctacctccgctct
tgggtctaccctgcttccaacctcgtcgatctagtccgatccctctcccacctcttcggc
atcgatccccctctgtacacccgtccgagccacacgccctctcctcccgccccttccccc
tctccctccttttcatccccatatggaagcggtggtggcgagcctactcgttttcctcct
cccccttcgacgcaggcccacttctcagctcgcccaaccgaggacccctctgaagtctac
cgccgcaatgctatctccaagatcctggagtccgtccatgctgacatggcgacgctgcgc
cactctcaagaggccgagatggagggcctcttctctacacaggccgaactgcggaggcgg
cagcaagagctcagccgtggcctccaggaaatgattcaggagaaggagggcttcgagcaa
cagctgcagcttgttctcatgaattcggatttgctcgaggggtgggtcagagagaatgag
gagctgtgtcggcgttgtcgtgagggggtagatgtggatgatgtcttcgagcctgtcgat
ggcctgtcaaggcagatgacggagtgcactgctgctgacatagcaatagaggacacaatc
tatgctctggacaaggctgttcaggaaggggcaataccgttcgattcatatctgaggact
gtgaggacattgtcgagggagcagttttttcaccgagcgacagcagctaagggtcgtgct
actctggttcatgcccaggttacaagtatggcttcaaggacgcaacaatatgtttcccaa
tga
DBGET
integrated database retrieval system