Zingiber officinale (ginger): 121984689
Help
Entry
121984689 CDS
T08725
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03018
RNA degradation
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121984689
09123 Folding, sorting and degradation
03018 RNA degradation
121984689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121984689
03041 Spliceosome [BR:
zof03041
]
121984689
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121984689
mRNA degradation factors
5'-3' decay
Lsm complex
121984689
Spliceosome [BR:
zof03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
121984689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
DUF150_C
Motif
Other DBs
NCBI-GeneID:
121984689
NCBI-ProteinID:
XP_042393701
LinkDB
All DBs
Position
5B:complement(81405032..81411404)
Genome browser
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFIDKGVQVKLTGGRQVMGTLKGYDQLLNLVLDEAIEFLRDPDDPLKT
TDQTRRLGLIICRGTAVMLVSPTDGTEEIQNPFIQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcaggaaggaaacagttctagatttggcaaagttcattgacaagggtgtccaa
gtcaagctaacaggaggaagacaagtgatggggactctaaaaggctacgatcagctgctt
aacttggtgctagatgaagctatagagtttcttagagatcctgatgatccactgaagact
acagaccagactagacgtcttggccttataatatgtaggggaactgctgtaatgcttgtg
tcaccaactgacggaacagaggaaattcaaaaccccttcatccagccagatggagcttaa
DBGET
integrated database retrieval system