Zingiber officinale (ginger): 121984733
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Entry
121984733 CDS
T08725
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-like
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121984733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
121984733
Spliceosome [BR:
zof03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
121984733
Complex B
121984733
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
121984733
NCBI-ProteinID:
XP_042393782
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Position
5B:84013899..84016270
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AA seq
203 aa
AA seq
DB search
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ
AAAFQVGATFNQHLMTMPGARPPLPLLIPPMLPVGASPHASMNAPLQPGVRPPVLPPPFG
VPGYGAVPPVAAVPSAVGPPGAPTTPMQPTNLPRPPTLPPPIPGAMAMPTTNTTAPAIHQ
GNPSSAPTTSFESFNAPSGSTAP
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtactactgcgattactgtgatacttacttgacccacgactctccatctgtg
agaaagcaacacaatgctggctataaacacaaggcaaatgtacgctcttactaccagcaa
tttgaggagcaacaaactcaaagtttaatcgaccagagaatcaaggaacatctcggtcag
gctgccgctttccaagttggtgccacttttaaccagcatctgatgaccatgccaggggcc
cgaccccctcttccacttttaatacctcctatgttgcctgttggagcatctcctcatgct
tctatgaacgcaccacttcaaccgggggttagaccccctgttttgccacctccatttggt
gtaccaggttatggagctgttcctccagtggccgctgtcccctctgcagtaggaccacct
ggtgcaccaacgacaccaatgcaaccaactaatcttcctaggccacctacattgccacct
ccaattccaggggccatggcaatgccaactaccaacactactgcacctgctatccatcag
ggcaacccatcatcagctccaacaaccagctttgaatcttttaacgctccttctggatcc
actgctccataa
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