Zingiber officinale (ginger): 121984771
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Entry
121984771 CDS
T08725
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
zof04517
IgSF CAM signaling
zof05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121984771
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121984771
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121984771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121984771
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zof04812
]
121984771
Membrane trafficking [BR:
zof04131
]
Others
Actin-binding proteins
Arp2/3 complex
121984771
Cytoskeleton proteins [BR:
zof04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
121984771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
WDR55
Beta-prop_IFT140_1st
EIF3I
PD40
WD40_Gbeta
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_WDR3_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Tricorn_2nd
Beta-prop_WDR36-Utp21_1st
RMC1_N
Ge1_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
eIF2A
BNR_3
Motif
Other DBs
NCBI-GeneID:
121984771
NCBI-ProteinID:
XP_042393837
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All DBs
Position
1B:complement(149329595..149346039)
Genome browser
AA seq
233 aa
AA seq
DB search
MAAVAIHQFAQCITCHAWSPDRSMVAFCPNNHEVHIYKFFGEKWERIHVLQKHDQIVSGI
DWSIKTNKIVTVSHDRNSYVWNQEASEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKKHNSSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGVDS
RDSGLNFFPWKGSGSGASGDVKFGEQIAQLDLSFTWAFGVRWSPSGNTLAYAG
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggttgcgatacatcagttcgcgcagtgcatcacctgccacgcatggagtcct
gatcgatccatggttgcattttgtcccaataaccatgaggtgcatatctacaaattcttt
ggcgaaaagtgggagaggatacatgttctccaaaagcatgatcaaattgtatctggaata
gattggagcataaaaactaacaaaattgtaactgtttcgcatgatcgtaactcatatgta
tggaatcaagaagcatcagagtgggtgcccacccttgtcattctcaggcttaatcgtgct
gcactttgtgtccaatggagtccaaaagaaaacaagtttgctgtcggaagtggtgctaaa
actgtttgcatatgctactatgaacaagagaataattggtgggtcagcaagcttatacga
aaaaagcataattcctctgttacaagtgttgcatggcatcccaataatattcttcttgca
acaacatctactgatggaaaatgtagggtgttttctactttcatcaaaggtgtggattca
agagactcaggattaaatttttttccttggaaaggatcaggatcaggtgcttctggtgat
gtaaaatttggagagcaaattgcccaacttgatctttctttcacatgggcatttggtgtg
aggtggtctccaagtggaaacaccttggcatatgcaggttag
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