Zingiber officinale (ginger): 121984887
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Entry
121984887 CDS
T08725
Name
(RefSeq) uncharacterized tRNA/rRNA methyltransferase slr1673-like
KO
K03437
RNA methyltransferase, TrmH family
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
121984887
Transfer RNA biogenesis [BR:
zof03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
121984887
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Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Motif
Other DBs
NCBI-GeneID:
121984887
NCBI-ProteinID:
XP_042393986
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Position
5B:complement(88831139..88834270)
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AA seq
345 aa
AA seq
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MPMAATPTLRPVSFSLANLSSPSPNIRCQGRGRRVSDSEGEGQLAPSSPPFLRPPARITS
AFNPFVKHCVKLRISSSYRRSCGSALVVGLTPILEICRFLKLKHEDYSLVDCLLLVDGAE
APEGFPSSSPVVNVSPSVMRKVSGIQSVDSTEAIALMKLPRSFLNLEENDEINQHCFPLL
HRLLVLDGIQDPGNLGTLLRSAMAFKWDGAFLLPSCCDPFNEKALRASRGASFQLPLVSG
SWSHLIALKSKHDMKLLAGHPESTVNGSNATRSLSHELVELLAGKPLCLVLGSEGKGLSK
QTVQTCELVSIPMAGGFESLNVSVAGGIFLFMLQPETHRHCVQNH
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggctgcaactccaactcttcgtcccgtctccttctcgttggctaacttgtct
tctccctctcccaacattcgatgtcaaggaagaggaagaagagtgtcagatagcgagggc
gaggggcaactcgcaccttcctctcctccatttctgaggccgcctgcgaggataacgagc
gcgttcaacccatttgttaagcactgcgtcaagctccggatcagctcctcataccgtcgc
tcctgcggttccgccctcgtcgtcggcctcacccccatcctggagatatgccggtttctg
aaactgaagcatgaggattattctttggtggattgccttcttttggtggatggtgcagaa
gcccctgaaggattcccttcatcctctccggttgtgaatgtgagcccttccgtaatgagg
aaggtttctggtattcagtcggttgattcgaccgaagctattgctcttatgaagctccct
agaagtttcttaaacctcgaggagaatgatgaaattaatcagcattgctttcctttgctt
caccggctgttggtccttgacgggatccaggaccctggtaacctaggcactttactaaga
tctgccatggctttcaaatgggatggtgcctttctgcttcctagctgctgtgatcccttc
aatgaaaaagcccttcgagcatcccgtggagcttcctttcaactccctctagtgtctggt
tcctggtctcacctaatagctctaaagtctaaacatgatatgaagctattggcaggccac
cccgagagtactgtgaacggatccaatgcaactcgctcactatctcatgaacttgtggag
ttgttggcaggtaaacccctatgcttggtattaggcagtgaagggaagggtctctctaag
caaactgtccagacttgcgagctagtgagcatacccatggctggtggtttcgagtccctt
aatgtttcagtcgccggaggaatatttctgtttatgctacaaccagaaacacatagacat
tgcgtgcagaaccattga
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