Zingiber officinale (ginger): 121984900
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Entry
121984900 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A-like isoform X1
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121984900
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121984900
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121984900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
zf-Nse
Motif
Other DBs
NCBI-GeneID:
121984900
NCBI-ProteinID:
XP_042394004
LinkDB
All DBs
Position
5B:89259995..89264046
Genome browser
AA seq
385 aa
AA seq
DB search
MDVTAKMESHLSSAAAFVEGGILDSCDDACSICLEAFCESDPSTVTSCKHEYHLQCILEW
CQRSSQCPMCWQTIILKDPTSQELLEAVVRERNIRLDNARTTTIFHHPALGDFEVQHLPI
GGNDAELEERIIQHLAAAAAMGRAHHITRREGRVRSGSHSRPQYLVFSTNSNVPSVGSVP
ASSPLGGDNESSSTSITAANTSAPNSSPGGESDQVINDLPSQVTQVPFLTSEAGSSPSRP
IISSPRAPTGHFSHVNHERPGPSELQSFPETLKSRFNAVSMRYKESIAKSTRGWRERLFS
RNSSVADIGSEVRREVNAGIATVSRMMERLDTRESRRTSSSSPSPSVEVHAIVDPNNEDV
TTNQADTLVNSGTSSTSDVATSAPN
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcactgcaaagatggagagccacttatcatcagctgcagctttcgtggaagga
ggcatcctggattcttgtgatgatgcttgcagcatctgtctagaagccttctgcgaaagt
gacccttccacggttactagttgcaagcacgaataccatctacaatgtattcttgaatgg
tgccaaagaagttctcagtgtcctatgtgttggcagactattattttgaaagatccaacc
agccaagaactactagaggctgtggtgcgtgaaaggaacataagacttgataatgcacga
actaccaccattttccatcatccagcacttggtgattttgaggtgcagcatttgcccatt
ggtggcaatgatgctgaactagaagagcgtatcattcaacatttggccgcagctgctgcc
atgggaagagcacatcacattaccagaagagaaggacgagttagatcaggatctcatagc
cgtccacaatatctagttttctctacaaattcaaatgttccatctgtgggttctgtgcct
gcttcctctcctttaggtggggataatgaatcgtcttccacttcaatcactgctgctaat
acatcagctccaaatagtagtccaggaggggaatctgatcaggtaatcaatgatcttcca
agtcaggttactcaggttccatttttgacatctgaggccggaagttctccaagcagacct
ataatttcaagtcccagggcacctactgggcatttttctcatgttaatcacgaaagacca
gggccttctgagttgcaatccttcccagaaactttgaaatctcgctttaatgcggtctca
atgaggtataaggaatctatagcaaaaagtactcgaggatggagagagcggctattttca
cgaaatagttctgtagcagatattggttctgaagtcagaagagaagtcaatgctggaatt
gctactgtatcacgaatgatggagcgcttggacacaagagaaagtagaagaacttcaagt
tcttctccttcacctagtgttgaagtacatgcgattgtggatccgaataatgaggatgtt
actaccaatcaagctgacactcttgtgaatagtggcacttcatcaacatctgatgtggca
acttcagctcctaactaa
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