Zingiber officinale (ginger): 121984927
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Entry
121984927 CDS
T08725
Name
(RefSeq) U-box domain-containing protein 44-like isoform X1
KO
K08332
vacuolar protein 8
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121984927
03029 Mitochondrial biogenesis [BR:
zof03029
]
121984927
Membrane trafficking [BR:
zof04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
121984927
Other autophagy associated proteins
Micronucleophagy
121984927
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121984927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Adaptin_N
HEAT_EZ
HEAT_2
XMAP215_CLASP_TOG
Anti-adapt_IraP
Motif
Other DBs
NCBI-GeneID:
121984927
NCBI-ProteinID:
XP_042394043
LinkDB
All DBs
Position
5B:89914368..89918307
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AA seq
832 aa
AA seq
DB search
MEDAATVARLLSRLMDAVDEAAALAAPPADAASPSSSRRCTAPMFVFSFLVARINPVLQS
LLLLQQEVGELPDASSRVSALESLGAELRRARSLAGRASSAGASSYAASVAVRLVEGAAR
CLGRGLLVLAGAWADAPVEIRTEMDALRGEMMEARFDGPIEEVGGGPALGDAEDLVVRIK
NADEDELWVVLFEIVVLTEEGFVGEEGGTLIPALLNRLTVTKGENRVKMIEVLRKLASHS
TENKEKMAGVEALSTIVRSLSRNVDESREAVGLLLDLSEVLKVRQRIGRIQGCMVMLVTL
RNGEDSIASEYAGRLLGVLSGNAHNVLLMAEAGYFSPLVRYLKEAGSEMNKILMANAISR
MKLTDQIRSTLGEEGSIEPLVNMFTSGKLEAKLSALGALRNLSILEENIKRLIDSGAIEH
LLQLLFSVTSVLVTLREPAAAILANIAESDRILTKKGMAPQMLSLLNHSSPAIQIHLFQA
LNRIASHSNAKRIRTKMRENGALQLLLPFLTESNNQIRIAALNLLVHISKDFDPAGECFD
QIGVAHLNLLVNIIAASTSDNEKSAALGILSNLPLNDKRVTDILVKENLLPVLISLFDTT
IARTLNPTKMCLLENIAGVMVRFTVPWDKKLQRTSASHGVISCLLKLLTCGSIVAKSKAA
VSLGQLSQNTVALVKVKPARWLCVPSSSETFCDVHNGNCVVKTTFCLVKAGAMSPLVQIL
QGKDREADEAVLEALATLLKDEIWENGSNAIEKATGVQALVRVLEVGNLKAQEKAIWMLE
RIFRLEGHREKYGEAAQLVLIDLAQKANPSLKSMIAKILAHLQLLQMQSSYF
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgcagcgactgtcgccaggcttctctcccgcctcatggacgccgtcgacgag
gcggccgccctcgccgcccctcctgccgatgccgcgtcgccctcctcttcccgccgctgc
actgcccccatgttcgttttctcctttctcgtcgcccgcattaaccccgtcctccaatcc
ctcctcctgctccagcaagaggtcggcgagttgcccgacgcgtcgagcagggtgagcgcc
cttgaatccctgggcgccgagctccgccgcgctcgctccctcgcagggagagcatcttcc
gccggagcttcttcctacgccgcctccgtcgccgtgaggctggtcgagggcgccgctcga
tgcctcgggcggggcctcctcgtcttggccggcgcgtgggccgatgcgccggtggagatt
cggaccgagatggatgcgcttcggggggagatgatggaagcgcggtttgatggcccaatc
gaggaggttggtggtggccccgctttgggcgacgccgaagacttggtcgtgcggattaag
aatgcggatgaagatgagctttgggtggttctttttgagattgtggtcctcacggaagaa
ggatttgtgggggaagaaggtggaacattgatccctgctctgctaaatcgattgactgtg
accaagggcgagaacagagtgaagatgattgaggtgctcaggaagcttgcatcgcacagc
accgagaacaaggagaaaatggctggtgttgaagctctttccactatagtgcgatcttta
tcgaggaatgttgatgagagtagggaagcagtggggctgcttttggatttgtctgaagtt
ctaaaagttcgacaaaggattggtaggatccaaggttgtatggtgatgcttgtcactttg
cgaaatggggaagatagcattgcatctgaatatgcaggaaggttattgggtgttttatca
ggcaatgctcacaatgtactccttatggctgaggctggttacttcagcccactagtacga
tacctaaaggaagcaggttctgagatgaacaagattcttatggcaaatgcaatttcaaga
atgaaactaacagatcagataagatctactcttggagaagagggatccattgaacccctt
gtaaacatgttcacctctggcaaacttgaagctaagttgtctgcattgggcgccttgcgc
aatctctctatattagaagagaacatcaagcgtttgattgattcaggtgccatagaacat
ttacttcaactcctattttctgtcacatcagtgctcgtgactcttcgagaacctgcagct
gctatacttgcaaacatagctgaatctgatcggattctgactaaaaagggtatggcgcca
caaatgctttcacttcttaaccattcaagtcctgcaatccagatccatctttttcaggcg
ctgaatagaattgcaagtcactccaatgccaaaagaatcagaactaaaatgagagaaaat
ggcgctctgcagctgcttttacctttcctaactgagagtaataatcagatcagaattgca
gccttaaacttactagtccacatctccaaagattttgatcctgccggcgagtgttttgat
cagattggggtagcacatctgaaccttctagttaatattatcgcagcgtcaacatcggat
aatgaaaaatctgctgctcttggcatactaagcaacctccccctcaatgacaaaagagtc
acagatatactcgtgaaggaaaatttgctccctgttttgatctctctattcgatacgacc
atcgcaaggactttaaatcctacaaaaatgtgtttgctcgagaacattgcaggtgtgatg
gtccgcttcaccgtaccttgggataagaaactgcaaaggacatcggcatcccatggtgta
atttcttgcttgttgaagttacttacatgcggttctatagttgccaaatctaaagctgct
gtttcactgggtcagctatcacagaacactgtggctttggtcaaggttaagcccgccaga
tggttgtgtgttccttcatcatctgaaacgttttgtgatgtccataatggcaattgcgtc
gtgaaaactacattttgtttggtcaaggccggcgctatgtctcctctagtacaaattctc
caaggcaaagaccgcgaagccgatgaggccgttctcgaagctttggcaacactactgaag
gatgagatttgggaaaatggaagcaacgcgatcgaaaaggcaaccggagtgcaagcactc
gtgagagtcctcgaagtcggtaatctgaaggctcaagagaaagcaatatggatgttggag
aggatctttcggctcgaaggccacagagagaagtacggcgaagctgctcaactcgttctc
atcgatctagctcagaaagcaaatccatctttaaaatccatgattgcgaaaatactggca
catcttcagctattgcagatgcaatcaagctacttctga
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