Zingiber officinale (ginger): 121984942
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Entry
121984942 CDS
T08725
Name
(RefSeq) DNA topoisomerase 2-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zof03032
]
121984942
03036 Chromosome and associated proteins [BR:
zof03036
]
121984942
Enzymes [BR:
zof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
121984942
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Topoisomerases
121984942
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
121984942
Centrosome formation proteins
Centriole proteins
121984942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
121984942
NCBI-ProteinID:
XP_042394065
LinkDB
All DBs
Position
5B:90111472..90118005
Genome browser
AA seq
1482 aa
AA seq
DB search
MAAAAKLPLQSSTLHNSTVGVAPALAPAPSAAAAGKKTIEQIYQKKTQLEHILLRPDTYI
GSVEKHTQNLWVYENGEMVYRPVTYVPGLYKIFDEILVNAADNKQRDSSMDAVKVVIDVE
ANLISIYNSGDGVPVEIHQEEKVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNI
FSTEFIIETADGRRQKKYKQVFNDNMGKKSQPSITKCKEGENWTKITFRPDLAKFKMTHL
EEDVVALMKKRVVDVAGSLGKSVKVELNGQRVPVKTFSDYVNLYLKSASKDKSEPLPRIA
EKVNERWEICVSLSEGQFQQVSFVNGIATIKGGTHVEYVTNQITNHIISIVNKKNKNANL
KAHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSFGSKCELSQDFLKKVAKSGVVNTL
LTWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMAG
VSVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEVQNIKQILGLQHGKEYDSTKGLRYGH
LMIMTDQDHDGSHIKGLLINFVHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFYSM
PEFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFKNIDKHKKDFLWVDEQDGEAIEL
AFSKKKIEARKNWLRQFEPENYLDQSEKLIKYSDFINKELILFSRADLQRSIPSMVDGLK
PGQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIGMAQDFVGSNNINL
MQPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLSEDGQSIEPSWYMP
IIPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVRRLLNNEPMKPLEPWYQGFKGRIEKSA
TKEAGVTYTITGTIEEIDSTTLRITELPVRRWTQDYKEFLESMMTGNDKIKEPFIKDYRE
HNDDKTVHFEVTLSEENMNIARQEGLEKKFKLTTTISTTNMHLFDSNSVIKKYDTPEQIL
EEFFNLRFVFYEKRKKALLNNLELDLLKLNNKVRFILGVVRDEIVVNKRKRADLFLELQQ
KGFTPFPKKTKGIDAAVAGTTEEDGEQEEESPQAGKGGAVASDYDYLMSMRIDSLTEEKV
QELCAQKDKLEAEVDELRRTSPQTLWLRELDALEEELDKLDRKEAEAEGARKEMRKNHIA
GVAPSKQAAKKPRKNTANKLSVDGTESSSTGTDAGQKKSRGGGSKRAPAKKQQTVEESDE
EEEILALKDRLAAYNLDSSPDHGAMETDTLVVDQEKPKKQPSRNAAAKKATYAVLSDDED
DEPEHHLMPTIDELEDDDDFSINEEVPKSVKGKGRKPRNETAATRKRGSTQAASKANSQK
PNTNVQPAARVSPEKKLRKMRASPFNKKSGSVLSRLTSSPSASEDSGGSNIAAAIDEVAA
AVTGRTRPKRDNRTKAIYVESDSEGEDEVEDDGTEDSDFQED
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgctgcgaagcttcccctccaatcgagcaccttacacaactctacggtaggg
gtcgctcctgccctcgcccccgctccgtccgctgctgccgctggcaagaagaccatcgag
cagatttaccagaagaagacgcagctggagcatatcctcctccgccccgacacttacatc
ggatccgtcgaaaagcacacccagaacctctgggtctacgagaatggcgagatggtctac
cgccccgtcacctacgtccccggcctctacaagatcttcgatgagatcctcgtcaacgcc
gccgacaacaagcagcgagactcctccatggacgccgtcaaggtcgtgatcgacgtcgag
gccaacctcatcagcatctataacagtggagacggcgtgccagttgagatccaccaggag
gagaaggtctacgtgccggagttgatctttggccatctcctaaccagcagtaactacgac
gacaacgtgaagaagaccacgggagggaggaacggctacggcgcaaaactcactaacatc
ttttccacggagttcatcatcgagaccgctgacggaagaagacagaagaaatacaagcag
gtgtttaatgacaacatgggtaagaaatctcagccctcaattacaaagtgcaaggaagga
gaaaactggacaaagatcacttttaggccagatttggccaaattcaagatgacgcacctt
gaagaagatgtggttgctctcatgaagaagagggtagttgatgtagctggaagtctaggc
aaatctgtcaaggtggagttgaatgggcaacgagtacctgtgaaaactttctccgattat
gtaaatctgtatcttaagtccgcatcaaaagacaaatctgaaccacttccaaggattgca
gagaaggtaaatgaaagatgggaaatttgtgtcagtctaagcgaagggcaattccagcag
gtcagttttgtaaatggtattgccacgatcaagggtggaactcatgtagagtatgtcact
aatcaaatcacaaatcacataatcagcatagtgaacaagaaaaacaagaatgctaacctt
aaggcacataatgtgaaaagtcatttgtgggtttttgtcaatgcactcattgacaaccct
gccttcgattctcaaaccaaagaaaccttgaccactcgacaaggaagttttgggtcgaaa
tgtgaactttcacaggatttccttaaaaaagttgctaagtcaggggttgtaaatacactg
ctcacgtgggctgattttaagcaaagcaaagaattgaagaaaacagatggtgccaagagg
cagagaattacaggcattcctaaacttgaggatgctaatgatgccggaggaaggaactcg
gacaagtgcacactgatactgactgaaggagattcagccaaggctcttgctatggcaggt
gtctctgtagtaggcaggaactattatggtgtgtttccactgagggggaagctgttgaac
gtcagagaagctaaccacaaacaaattatggacaatgctgaagtccagaacataaagcaa
atccttggtttgcagcatgggaaggagtatgatagcactaaaggattgagatatggtcat
ctaatgataatgacagatcaggatcacgatggttcccacatcaagggattgcttattaac
tttgtccatacattttggccctcattgctgaaagttccctcttttatggttgaattcata
accccacttctgaaggctactaataacagaaccaagactgtcctctcattctactccatg
cctgagtttgaagcgtggaaagaaagtttgggtggaaattcaaatggttggtcaattaag
tactataaggggttgggcacgagtaaatccgaagaaggaaaagagtattttaagaacata
gacaaacacaaaaaagatttcctatgggtggacgagcaggatggtgaagcgatcgagtta
gcattcagcaagaaaaagattgaggctagaaaaaattggcttcgccaatttgagccagag
aattatctcgatcaatcagaaaagttgattaaatacagtgatttcatcaacaaggaattg
atcctattctctagagcagatctacaaagatcaattccttctatggttgacggcttgaag
ccaggccaaaggaaaattttgttttgtgctttcaagagaaattttgttaagcaggctaag
gttgcccagtttattggttatgtctctgagaactcagcttaccatcacggtgaacagagc
cttgctactaccataattggcatggctcaagattttgtgggcagtaacaacataaatctt
atgcaacctgaaggacagttcggtaccagacaccagggaggcaaagaccacgccagtgca
agatatattttcacttgcttggctccaatcacaaggtttttgtttccgaaggatgatgac
attcttcttgactacctaagtgaggatgggcagtcaattgaaccttcttggtatatgccg
atcatccctttggttttagtcaatggaagcgaggggattggcactggatggagttcctac
attcctaactacaatccaaaagacattgttgctaatgttaggcgattgttgaacaatgaa
ccaatgaagcctctggaaccgtggtaccagggatttaagggtcggatagagaaatctgcg
acaaaggaagctggtgtaacctacacaataactggtacgatagaggaaatcgacagcaca
acactcaggataacggagttacctgttcgtagatggacccaggattacaaagaattcctt
gagtctatgatgaccgggaacgataagattaaggaaccctttatcaaggactatcgggaa
cacaacgacgataaaacagtacacttcgaagttactctgtctgaggaaaatatgaacatt
gcgcggcaagaagggcttgagaaaaagtttaagctgacgactactattagcaccaccaac
atgcacttgtttgattcaaactctgtcatcaagaaatacgatactccagagcaaattctc
gaagagttttttaacctgagattcgtattttacgagaagagaaagaaagcgctgttgaac
aatcttgagttagatttgctgaagttgaacaacaaagtgaggttcatccttggtgtagtc
agagatgagatagtagtcaataagcgaaagagagcagatttattccttgagctgcagcag
aaggggttcacaccctttccaaagaaaacaaaaggcatcgatgctgctgttgctggaacc
acggaagaagatggcgaacaagaagaagaaagcccgcaagcaggaaaaggaggggcagtg
gctagtgactatgactatttgatgtccatgcgcatagattccttgactgaagaaaaagtc
caagagctttgtgctcaaaaagacaaactagaagctgaggtggatgagctaagaagaaca
tccccccaaactttatggttgagggagcttgatgcattagaagaggagttagataaactc
gatcgaaaagaagctgaggcagagggagcgaggaaggagatgagaaagaaccacattgcc
ggggttgcaccttcgaaacaagcagctaagaagccgagaaaaaacacagcaaacaaatta
tctgtcgatggaacagagagtagttctacggggactgatgcaggccagaagaaatctaga
ggagggggatccaagagagctcctgctaaaaagcagcaaacggttgaagaaagtgacgaa
gaagaagagatactcgcgttgaaagaccgacttgcggcatacaatcttgattcttcccct
gatcatggagcaatggaaactgacacactagtagtagaccaggaaaagccaaagaagcag
ccaagcagaaatgctgctgcgaagaaggcaacatatgctgtcctatccgacgatgaggat
gacgaacctgaacatcacctcatgccaaccatcgatgaactcgaagacgacgatgatttc
agtatcaatgaggaggtccctaaatcagtgaaaggcaaagggagaaagcctaggaatgaa
actgccgccaccaggaagaggggttccacacaggcagcaagcaaggccaacagtcagaag
cccaacaccaacgtgcagcctgccgcccgggtatcaccggagaagaagctcaggaagatg
agggcgtctcctttcaacaagaaaagtggatcagtcttgagtagactaacaagttctccc
tccgctagcgaagactcaggtggctccaacatcgcagcagcaatcgatgaagtggcagca
gcagtaacaggaaggacgagaccgaagagagacaacagaaccaaagccatttatgtggag
agtgattctgaaggagaagatgaggtggaagatgatggcacagaggattctgacttccag
gaggactaa
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