Zingiber officinale (ginger): 121984962
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Entry
121984962 CDS
T08725
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
121984962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121984962
03029 Mitochondrial biogenesis [BR:
zof03029
]
121984962
Membrane trafficking [BR:
zof04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121984962
Atg1 complex
121984962
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121984962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
121984962
NCBI-ProteinID:
XP_042394097
LinkDB
All DBs
Position
5B:90734541..90742260
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AA seq
583 aa
AA seq
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MASPSETDRTEQIIVHFLHKTLHTVLASRIPHIRLAPRPSSGKRDRWFHLDLGDLPGPIA
HHGAFMDPLVIDVLLSPRRDASESGSGETVVERWTAQCVPWHGAPQHPHDVGSFQPRTYK
KSVILLRSLYALLRLLPAHRIFRMLCSSGQPYNYDLGYRVYSFAPPFSRAEGADLKRYSF
TPVETLFGQIVVSVEYRPSLAAFNLEISPLMPPMIITDYIGSPAAEPSRPFPSSLPNWAS
RPTTSQNPPRGFRPSTVAAPQLDRPHSWNAAPMAHHPLSSPHDRVDKVGSSPPEHYDRLG
PNQRSVSDRKANFKFDDFRLSPPFSTSTSPSPPTLGGHSLQSRLQMETAPMSIPMSATGK
SQMHRSPNLSDPFKSLLPPPSPRSTRLDPSSQESPSKSRSFRKSEGLSGGDIYSNLHMYA
AYKGLKDGRDDSGRFSALSSGGSPRYAFSRSSSRFSMQDDLDDTDFSYPFAVDDVDTLDS
HTRSPDVKDAEYSSSHKSQKAAVGSLVHMLKTAPPLRQDQSCSSQSSDLNGEVSMNSSFL
SRKTSDALEELQTYKEMKNFLLSESGAMTKLQESLRQKNRNKE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccccctccgagaccgatcgaacggagcagatcatcgtccacttcctccacaag
actctccataccgtgctcgcctcccgcatcccccacatccgcctcgcgccccgaccgtca
tccggaaagcgagaccgatggttccacctcgacctcggcgacctcccgggtccgatcgcg
caccatggcgccttcatggacccgttggtcatcgacgtcctcctaagtccgcgacgcgac
gcctctgaatccggttctggggagaccgttgtcgagcgctggactgcgcagtgcgttccc
tggcacggcgccccgcagcacccccatgatgttggctctttccaacccagaacctacaag
aagtcggtaattttgctcagatcgctatacgcgctgctccggctcctcccggctcaccgg
atcttccggatgctgtgctcctctggtcagccttacaattacgatcttggctaccgggtt
tactccttcgcgccgccattttctagggcggaaggggcggatttgaagcgatacagcttc
acgccggtggagaccctcttcggccagatcgttgtttcggtggagtaccgccccagcctc
gcggcatttaacctagaaatttctcccctgatgccaccgatgatcataaccgattacatc
ggtagtccggctgccgagcccagtaggcctttcccctcttcgctgcccaattgggcatct
cgacccaccacgtctcagaatccacccaggggcttccggccatcgacggtggcggcccct
caactggatcgcccgcacagctggaacgctgcgcccatggcgcaccacccgctcagttca
ccgcacgatcgggttgacaaggtaggatcctcacctcctgaacattatgaccgcttgggg
ccgaaccagcggtcggtgagcgatcggaaggcaaatttcaagtttgatgattttcggctc
tccccaccgttctcgacatcgacgtccccttcgcctcccacgcttggtggtcattccctc
caatcaaggctacagatggagacggcaccgatgagcataccaatgtcagcaactgggaag
agccagatgcatcgcagtcctaacctctcggatcctttcaagagccttttgccacctcca
tctcctagaagcacaagactcgatccttcaagccaggagtctccttccaagagcagatct
ttcagaaagtcagaaggtttgagtggaggcgatatctattcaaacttgcatatgtacgct
gcatataagggtctcaaggatggtcgggatgattctggaaggttctctgctttgtcttct
ggtggctcacctaggtatgccttttcaagaagttcaagccgattctcaatgcaggatgat
ctggacgatacagatttctcttacccatttgctgtggatgatgttgacacattagattct
catacaaggagccctgatgttaaggatgcagaatactcttcctcccataagtcccaaaag
gcagctgttggaagtcttgtccacatgttaaagaccgcgcctccacttcgccaagatcag
agctgttcatcgcagtcttccgacttaaatggagaagttagcatgaatagttccttcttg
tctaggaaaacaagtgacgcattggaggaactccaaacctacaaagagatgaagaacttt
cttctttccgagagtggagctatgactaagctacaagaatctcttcgacagaaaaacaga
aacaaagagtga
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